BO26462.complete Sequence
1870 bp assembled on 2010-07-15
GenBank Submission: KX799932
> BO26462.complete
GAAGTTATCAGTCGACATGAACAAACAAGTTATATTCGGCCTGCTCCTCG
CTTGCATTTTGGTGTGCATTTCAGGACAGGATGAGGAGGATTACCAGGAG
TCGCCAACGGTACTGATTGCCCTGCTGGTGCGGAACAAAGCCCACATACT
GCCCATGTTCCTCAGCTACCTGGAGCAGCAGGACTATCCAAAGGAAAGAA
TAGCAATTTGGTTGCGCTGTGATCACAGCAACGATGACAGCATAGAGCTA
TTGCGGCAGTGGCTGGACAACTCGGGGGATCTTTATCACAGCGTAAGCTA
CGAATTTAAGCCGGAGGAGCAGAGCTTTGTCAACGGGACTTCACCGTACG
AGTGGCCCGCATCGCGTTTCAAGCACCTAATCGCCCTGAAAGAGGAGGCC
TTTCAGTATGGTCGCGATATTTGGGCTGACTACGTGTTTTTCCTGGACGC
CGATGTCTTGCTAACTTCAAAAGATTCGCTAAAAGTCCTCACCCGACTCC
AATTACCAATTGTGGCTCCCATGCTGATCTCGGAGAGCTTATACTCGAAT
TTCTGGTGTGGCATGACGGAGGACTACTACTACAGACGCACCGATGAGTA
CAAGGAAATCTATCATGTGAAAAAGCAAGGCAGCTTCCCAGTGCCAATGG
TCCACACAGCCGTTTTGGTGAACATGAACCATCGAGCGGTTAGGAATCTC
ACCTTCGATAGGAACAAGCTGGTGGAATTGCAGAAATCCCGACAGCAAGA
GCCACTGTACGATGGACCAGCCGATGACATCATTGTGTTCGCCATATCGG
CCAACAGTTCAGGCATTCCCTTGCACATTTGCAACGACATAACCTTTGGT
TATATACTGCAGCCATTGGAACCAGGCGATACCTTGGACCACGACGTACA
ACAGCTGGTGAACCTCAAGAGCATTATGGTCAATGAACTCGGCGCAGTGC
CGCCACTGCTGGACTACTACAAGCATTTGGAGAAGAAACCGGAGAAGAGC
AAACTCTCCTTGGACCGCATATTTATGATTAATCTAAAAAGACGACCCGA
GCGGCGAGAGAAAATGGAAAGGCTGTTCGACGAGATCGGAATAGAGGCGG
AGCACTTCCCGGCCGTTGATGGCAAAGAACTGAGCACGGAAAGGCTGCTG
GAGATGGGCGTACGATTTCTGCCCGGCTACGAGGATCCCTATCATCATCG
GGCGATGACAATGGGCGAGATTGGCTGCTTTCTGAGCCACTACAACATCT
GGGTGATGATGGTGCGCAAGCAACTGAAGGAGGTGCTCATTCTGGAGGAC
GATATACGTTTCGAGCCGTATTTCCGACAGAACGCAGTCAGAATTCTCAA
CCAGGCCAGGAATGCCGCACAGTACGACCTGATTTACTTTGGCCGCAAAC
GTTTGAAGGAGGAAAGCGAGCCGGCTGTGGAGAATGCGGATAATCTGGTG
CACGCTGGCTACTCGTACTGGACACTGGGCTACGTTATATCCCTGCAGGG
TGCACTGAAACTGCTGGCCGCCAAGCCGCTGGACAAGCTCATACCGGTCG
ATGAGTTTCTGCCGCTGATGTTCGATCGTCATCCGAACAAAACGTGGACG
GAAGCCTTTCCCAAGCGTAATCTTGTTGCCTTCAGCGCCTCGCCGCTTCT
GCTGTATCCCATTTACTATACTGGTGAATCTGGTTATATATCCGACACCG
AGGACTCGCAACAAATCAGCGTGGAGACGAGCGAGGAGGGCGAGGCCAGG
CTAAAGAGCGATCGAGAGCAGGTTTTCGACCATGAGCAGGAATTCAAGCT
CAATCCGGAACTCAAGCTGGGCGAGAGCTTGTCCAAGAGCCACCAGGAAC
TGGCAAGCTTTCTAGACCAT
BO26462.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-27 00:59:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31915-RA | 1839 | CG31915-PA | 1..1836 | 17..1852 | 9180 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-27 00:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31915-RA | 2487 | CG31915-RA | 131..1966 | 17..1852 | 9180 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-27 00:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5528519..5530161 | 210..1852 | 8215 | 100 | Plus |
| 2L | 23513712 | 2L | 5528253..5528449 | 17..213 | 985 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-27 00:59:26 has no hits.
BO26462.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 12:26:13 Download gff for
BO26462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 167..2002 | 17..1854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 04:41:10 Download gff for
BO26462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 131..1966 | 17..1854 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-27 02:15:41 Download gff for
BO26462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31915-RA | 131..1966 | 17..1854 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-27 02:15:41 Download gff for
BO26462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5528253..5528446 | 17..210 | 100 | -> | Plus |
| 2L | 5528520..5530161 | 211..1854 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 04:41:10 Download gff for
BO26462.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5528253..5528446 | 17..210 | 100 | -> | Plus |
| arm_2L | 5528520..5530161 | 211..1854 | 99 | | Plus |
BO26462.pep Sequence
Translation from 16 to 1870
> BO26462.pep
MNKQVIFGLLLACILVCISGQDEEDYQESPTVLIALLVRNKAHILPMFLS
YLEQQDYPKERIAIWLRCDHSNDDSIELLRQWLDNSGDLYHSVSYEFKPE
EQSFVNGTSPYEWPASRFKHLIALKEEAFQYGRDIWADYVFFLDADVLLT
SKDSLKVLTRLQLPIVAPMLISESLYSNFWCGMTEDYYYRRTDEYKEIYH
VKKQGSFPVPMVHTAVLVNMNHRAVRNLTFDRNKLVELQKSRQQEPLYDG
PADDIIVFAISANSSGIPLHICNDITFGYILQPLEPGDTLDHDVQQLVNL
KSIMVNELGAVPPLLDYYKHLEKKPEKSKLSLDRIFMINLKRRPERREKM
ERLFDEIGIEAEHFPAVDGKELSTERLLEMGVRFLPGYEDPYHHRAMTMG
EIGCFLSHYNIWVMMVRKQLKEVLILEDDIRFEPYFRQNAVRILNQARNA
AQYDLIYFGRKRLKEESEPAVENADNLVHAGYSYWTLGYVISLQGALKLL
AAKPLDKLIPVDEFLPLMFDRHPNKTWTEAFPKRNLVAFSASPLLLYPIY
YTGESGYISDTEDSQQISVETSEEGEARLKSDREQVFDHEQEFKLNPELK
LGESLSKSHQELASFLDH
BO26462.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-28 01:09:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31915-PA | 612 | CG31915-PA | 1..612 | 1..612 | 3208 | 100 | Plus |
| Plod-PB | 721 | CG6199-PB | 267..454 | 16..218 | 173 | 26.9 | Plus |
| Plod-PA | 721 | CG6199-PA | 267..454 | 16..218 | 173 | 26.9 | Plus |
