BO26501.complete Sequence
772 bp assembled on 2010-07-01
GenBank Submission: KX798394
> BO26501.complete
GAAGTTATCAGTCGACATGTCTGGTAAATACGATCTGCTCAGTGAGCAGG
GCCTCCGTCTGGACGGACGACGTCCTCATGAATTGCGCCGCATCAAGTGC
AAACTGGGAGTCTTCGAGCAGCCCGATGGAAGTGCCTACATGGAGCAGGG
AAACACCAAGGTTCTGGCTGCCGTCTATGGACCCCACCAGGCCAAGGGCA
ATCAGACAGAGTCCGTCATCAACTGTCAGTACAGTCAGGCAACCTTCTCC
ACGGCGGAGCGCAAAAATAGGCCGCGCGGCGATCGCAAATCTCTGGAGTT
CAAGTTGTACCTGCAGCAGGCGCTAAGTGCTGCCATTAAATCAGAACTAT
ATCCCCGCTCCCAGATAGACATATACGTGGAGGTGCTCCAAGACGACGGC
GCCAACTATGCGGTGGCTCTTAATGCCGCCACACTGGCGCTAATTGATGC
GGGAATCTGCCTCAATGAGTTCATTGTCGCCTGCACCGCCTCACTGAGCA
AATCGAACATCCCGCTCACAGACATCTCTCAGTTCGAGGAGGTATCCGGC
GGACCGAAGCTAACCGTGGCTGCCTTGCCTACCGCCGAGAAAATCGCCTT
TCTTGAGATGAGTGAGCGGTTCCACATCGATCACTTGGAAACCGTCATCG
AGACTGCTATGGCGGGTTGCCGCGAAATAAGGGACATTCTGGAGGCAGCA
GTCAAGGAGCACCTTCTGCACATGGGCAGTGCCTCTGACTTTGCGAAAGT
TGGTGCAAGCTTTCTAGACCAT
BO26501.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ski6-RB | 741 | CG15481-PB | 1..738 | 17..754 | 3675 | 99.9 | Plus |
| Ski6-RA | 741 | CG15481-PA | 1..738 | 17..754 | 3675 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ski6-RB | 903 | CG15481-RB | 79..816 | 17..754 | 3675 | 99.9 | Plus |
| Ski6-RA | 911 | CG15481-RA | 87..824 | 17..754 | 3675 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:47
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 13221484..13222221 | 754..17 | 3675 | 99.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:02:47 has no hits.
BO26501.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:58 Download gff for
BO26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ski6-RA | 95..832 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:13 Download gff for
BO26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ski6-RA | 87..824 | 17..756 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:27 Download gff for
BO26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ski6-RA | 87..824 | 17..756 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:27 Download gff for
BO26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 13221481..13222221 | 17..756 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:13 Download gff for
BO26501.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 13221481..13222221 | 17..756 | 99 | | Minus |
BO26501.pep Sequence
Translation from 16 to 772
> BO26501.pep
MSGKYDLLSEQGLRLDGRRPHELRRIKCKLGVFEQPDGSAYMEQGNTKVL
AAVYGPHQAKGNQTESVINCQYSQATFSTAERKNRPRGDRKSLEFKLYLQ
QALSAAIKSELYPRSQIDIYVEVLQDDGANYAVALNAATLALIDAGICLN
EFIVACTASLSKSNIPLTDISQFEEVSGGPKLTVAALPTAEKIAFLEMSE
RFHIDHLETVIETAMAGCREIRDILEAAVKEHLLHMGSASDFAKVGASFL
DH
BO26501.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:24:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ski6-PB | 246 | CG15481-PB | 1..246 | 1..246 | 1244 | 100 | Plus |
| Ski6-PA | 246 | CG15481-PA | 1..246 | 1..246 | 1244 | 100 | Plus |
| Mtr3-PA | 326 | CG8025-PA | 33..201 | 11..176 | 191 | 31.4 | Plus |
| Rrp46-PA | 233 | CG4043-PA | 13..206 | 22..221 | 150 | 23.8 | Plus |
