BO26507.complete Sequence
496 bp assembled on 2010-07-01
GenBank Submission: KX798928
> BO26507.complete
GAAGTTATCAGTCGACATGCTGCCACTTTCACTTTTAAAAACAGCACAGA
GCCATCCCATGTTGGTGGAGCTGAAAAATGGTGAAACATACAATGGTCAC
CTGGTTAGTTGCGACTCGTGGATGAATATTAATCTGCGCGATGTTATTTG
CACCTCAAAGGATGGCGATCGGTTTTGGCGCATGCCCGAATGTTATATCC
GCGGGAGCACCATCAAATATCTGCGAATCCCCGACGAAGTAATCGACATG
GTCAAGGAGGACGCGCAGGCCAAGTCAAGGAATCGCACAGAGATGAACAA
AAACCGCGGCGGCAACTCGTCGCAAAATCAGCGCGGCGGACGTCCTGGTG
GCGGCAACCGCAACAATGTCGGCAATCGTCCCGGCCAGGGATACGGAGGT
GCTGCTAACAACGCGATGCGCCTGGGTGGCGCTGCTGGCCAAGGGAACCG
TCTGCCCCACGCCGCCAAAAATAGGAAAGCAAGCTTTCTAGACCAT
BO26507.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17768-RB | 465 | CG17768-PB | 1..462 | 17..478 | 2310 | 100 | Plus |
| CG17768-RA | 465 | CG17768-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| LSm-4-RB | 1578 | CG33677-RB | 1075..1536 | 17..478 | 2310 | 100 | Plus |
| CG17768-RB | 530 | CG17768-RB | 27..488 | 17..478 | 2310 | 100 | Plus |
| CG17768-RA | 1578 | CG17768-RA | 1075..1536 | 17..478 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 10403239..10403558 | 478..159 | 1600 | 100 | Minus |
| 2L | 23513712 | 2L | 10403729..10403829 | 161..61 | 505 | 100 | Minus |
| 2L | 23513712 | 2L | 10403891..10403933 | 61..19 | 215 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:02:28 has no hits.
BO26507.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:51 Download gff for
BO26507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| LSm-4-RB | 1040..1501 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:04 Download gff for
BO26507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17768-RA | 1075..1536 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:20 Download gff for
BO26507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG17768-RA | 1075..1536 | 17..480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:20 Download gff for
BO26507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 10403237..10403556 | 161..480 | 99 | <- | Minus |
| 2L | 10403730..10403828 | 62..160 | 100 | <- | Minus |
| 2L | 10403891..10403934 | 17..61 | 97 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:04 Download gff for
BO26507.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 10403237..10403556 | 161..480 | 99 | <- | Minus |
| arm_2L | 10403730..10403828 | 62..160 | 100 | <- | Minus |
| arm_2L | 10403891..10403934 | 17..61 | 97 | | Minus |
BO26507.pep Sequence
Translation from 16 to 496
> BO26507.pep
MLPLSLLKTAQSHPMLVELKNGETYNGHLVSCDSWMNINLRDVICTSKDG
DRFWRMPECYIRGSTIKYLRIPDEVIDMVKEDAQAKSRNRTEMNKNRGGN
SSQNQRGGRPGGGNRNNVGNRPGQGYGGAANNAMRLGGAAGQGNRLPHAA
KNRKASFLDH
BO26507.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:23:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG17768-PB | 154 | CG17768-PB | 1..154 | 1..154 | 828 | 100 | Plus |
| CG17768-PA | 154 | CG17768-PA | 1..154 | 1..154 | 828 | 100 | Plus |
| SmD3-PA | 151 | CG8427-PA | 5..147 | 2..143 | 157 | 29.9 | Plus |
