Clone BO26510 Report

Search the DGRC for BO26510

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:265
Well:10
Vector:pDNR-Dual
Associated Gene/TranscriptmRpL2-RA
Protein status:BO26510.pep: Imported from assembly
Sequenced Size:916

Clone Sequence Records

BO26510.complete Sequence

916 bp assembled on 2010-07-01

GenBank Submission: KX794533

> BO26510.complete
GAAGTTATCAGTCGACATGCAAAGTGTAACACGTTTGCTGAGCACAACGC
TGACTATACAAACGCCGTTTCGCACGGCGCCGGCGTTTCTGCAGCAATTG
CGCGGCAAAACCAAAGTGGTGGAGAAACCAAAACCTGGTGCCGGACAGCA
ATTCCGACGAACCGTGCACTTTCCGGAGAAGTACACCGTTGAGCCGCTGA
AGATCACCCATTTGGCTGGTCGGGATCCCGTCTCCGGTCGCTTGGTGGCC
AAGGGCATTGGCGGAGGCATCAAACAGCAGTATCGCTGGGTTAAATGGGT
GCGGGATGGTCCCACGGAGGGCGCCCAGGAGGAACTGGTACTCGAGGTGC
TACGCGATGGCTGTCGCACCGCCAAAGTGGCCCTGGTTGCCGTCGGCGAT
GAGCTGAAGTACATCCTGGCCACCGAGAACATGAAGGCTGGCGATATCCT
CAAGACCTCGCGCTTTATTCCTAGGATTCCGGTGCGTCCCAACGAAGGCG
ATGCCTATCCATTGGGCGCCTTGCCCGTGGGCACACGCATTCACTGTCTG
GAGAAGAACCCCGGCCAGATGTGCCACCTGATCCATGCCGCCGGCACCTT
CGGCACCATTCTGCGCAAGTTCGACGAAAAGGTGGTGGTGCAGCTGCCCT
CGAAGCGGGAGTTCGCCTTCCAGCGCACCTGCATGGCGACGGTTGGTCGC
CTGTCCAACCCGGAACACAACAAGGAGCATGTGGGCAGTGCCCAGCGGAT
GCGGGAGATGGGCAATCGACCACGTTCCGGTCTGTGGAAGCGCAAGGAAG
GCAAACACGGACGCAAGATACGCCGATTGCCGCCCATGACCACCATATCG
CCACCGGCTCCGCCCAAGGAGGAGGCCATCAAGTTGACGCTGCCCCTGGC
AAGCTTTCTAGACCAT

BO26510.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:55
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL2-RA 885 CG7636-PA 1..882 17..898 4410 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:56
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL2-RA 1039 CG7636-RA 95..976 17..898 4410 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 11120941..11121406 17..482 2330 100 Plus
3L 28110227 3L 11121562..11121978 482..898 2085 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:02:55 has no hits.

BO26510.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:04:01 Download gff for BO26510.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL2-RA 83..964 17..900 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:17 Download gff for BO26510.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL2-RA 95..976 17..900 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:29 Download gff for BO26510.complete
Subject Subject Range Query Range Percent Splice Strand
mRpL2-RA 95..976 17..900 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:29 Download gff for BO26510.complete
Subject Subject Range Query Range Percent Splice Strand
3L 11120941..11121406 17..482 100 -> Plus
3L 11121563..11121978 483..900 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:17 Download gff for BO26510.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 11114663..11115078 483..900 99   Plus
arm_3L 11114041..11114506 17..482 100 -> Plus

BO26510.pep Sequence

Translation from 16 to 916

> BO26510.pep
MQSVTRLLSTTLTIQTPFRTAPAFLQQLRGKTKVVEKPKPGAGQQFRRTV
HFPEKYTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKWVRDGPT
EGAQEELVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRF
IPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILR
KFDEKVVVQLPSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGN
RPRSGLWKRKEGKHGRKIRRLPPMTTISPPAPPKEEAIKLTLPLASFLDH

BO26510.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:24:24
Subject Length Description Subject Range Query Range Score Percent Strand
mRpL2-PA 294 CG7636-PA 1..294 1..294 1541 100 Plus