BO26510.complete Sequence
916 bp assembled on 2010-07-01
GenBank Submission: KX794533
> BO26510.complete
GAAGTTATCAGTCGACATGCAAAGTGTAACACGTTTGCTGAGCACAACGC
TGACTATACAAACGCCGTTTCGCACGGCGCCGGCGTTTCTGCAGCAATTG
CGCGGCAAAACCAAAGTGGTGGAGAAACCAAAACCTGGTGCCGGACAGCA
ATTCCGACGAACCGTGCACTTTCCGGAGAAGTACACCGTTGAGCCGCTGA
AGATCACCCATTTGGCTGGTCGGGATCCCGTCTCCGGTCGCTTGGTGGCC
AAGGGCATTGGCGGAGGCATCAAACAGCAGTATCGCTGGGTTAAATGGGT
GCGGGATGGTCCCACGGAGGGCGCCCAGGAGGAACTGGTACTCGAGGTGC
TACGCGATGGCTGTCGCACCGCCAAAGTGGCCCTGGTTGCCGTCGGCGAT
GAGCTGAAGTACATCCTGGCCACCGAGAACATGAAGGCTGGCGATATCCT
CAAGACCTCGCGCTTTATTCCTAGGATTCCGGTGCGTCCCAACGAAGGCG
ATGCCTATCCATTGGGCGCCTTGCCCGTGGGCACACGCATTCACTGTCTG
GAGAAGAACCCCGGCCAGATGTGCCACCTGATCCATGCCGCCGGCACCTT
CGGCACCATTCTGCGCAAGTTCGACGAAAAGGTGGTGGTGCAGCTGCCCT
CGAAGCGGGAGTTCGCCTTCCAGCGCACCTGCATGGCGACGGTTGGTCGC
CTGTCCAACCCGGAACACAACAAGGAGCATGTGGGCAGTGCCCAGCGGAT
GCGGGAGATGGGCAATCGACCACGTTCCGGTCTGTGGAAGCGCAAGGAAG
GCAAACACGGACGCAAGATACGCCGATTGCCGCCCATGACCACCATATCG
CCACCGGCTCCGCCCAAGGAGGAGGCCATCAAGTTGACGCTGCCCCTGGC
AAGCTTTCTAGACCAT
BO26510.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:55
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL2-RA | 885 | CG7636-PA | 1..882 | 17..898 | 4410 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:56
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL2-RA | 1039 | CG7636-RA | 95..976 | 17..898 | 4410 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11120941..11121406 | 17..482 | 2330 | 100 | Plus |
3L | 28110227 | 3L | 11121562..11121978 | 482..898 | 2085 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:02:55 has no hits.
BO26510.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:04:01 Download gff for
BO26510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL2-RA | 83..964 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:17 Download gff for
BO26510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL2-RA | 95..976 | 17..900 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:29 Download gff for
BO26510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
mRpL2-RA | 95..976 | 17..900 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:29 Download gff for
BO26510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11120941..11121406 | 17..482 | 100 | -> | Plus |
3L | 11121563..11121978 | 483..900 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:17 Download gff for
BO26510.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11114663..11115078 | 483..900 | 99 | | Plus |
arm_3L | 11114041..11114506 | 17..482 | 100 | -> | Plus |
BO26510.pep Sequence
Translation from 16 to 916
> BO26510.pep
MQSVTRLLSTTLTIQTPFRTAPAFLQQLRGKTKVVEKPKPGAGQQFRRTV
HFPEKYTVEPLKITHLAGRDPVSGRLVAKGIGGGIKQQYRWVKWVRDGPT
EGAQEELVLEVLRDGCRTAKVALVAVGDELKYILATENMKAGDILKTSRF
IPRIPVRPNEGDAYPLGALPVGTRIHCLEKNPGQMCHLIHAAGTFGTILR
KFDEKVVVQLPSKREFAFQRTCMATVGRLSNPEHNKEHVGSAQRMREMGN
RPRSGLWKRKEGKHGRKIRRLPPMTTISPPAPPKEEAIKLTLPLASFLDH
BO26510.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:24:24
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
mRpL2-PA | 294 | CG7636-PA | 1..294 | 1..294 | 1541 | 100 | Plus |