BO26512.complete Sequence
556 bp assembled on 2010-07-01
GenBank Submission: KX798724
> BO26512.complete
GAAGTTATCAGTCGACATGGCTCCCCAGCAAAAGGGTAAACAAGGCACGA
AGGGCGCCAAGCAAATCGTGGAGGAAAACAAGACTACACTGACTTTCTAC
CGGAACATGGCCATTGGATGTGCTGCACCCGCTCTGCTCCTCAGTTTCCT
GGTCTTCGAAGTCACCAAAACCTCAGTGTTTATGCACATTCTTTCGTTGC
TGATCCTGGGGAGCTCCTACCAGTTTATGGCGTTCATGTCGCAGGCCAAA
TACTCTGAGAGCGGTGCTCTTTTGGACTCCGGCAACGACTTAAATATGGA
AGGCGGCATCGCGGAAAACGTTAAGGATTTGATCATCCTTACTTCCGGCA
CCCTGCTGCTGGCCCTCATCTCAAACTACTTCTGGTTGGTGCTGCTTTTG
GCGCCCATACGAGCTGGATGGATGCTCTGGGGCTCCGTCATCCAGCCGTG
GCTGTCGCAACGCAACGCCCAGGACGATAATCCCCAGGTGGACGAGAAAA
AGCAAAAAAAGATGGATCGCAGAATGCGTCGCATGAGAGCAAGCTTTCTA
GACCAT
BO26512.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8320-RA | 525 | CG8320-PA | 1..522 | 17..538 | 2610 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8320-RA | 981 | CG8320-RA | 161..683 | 16..538 | 2615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 15993187..15993409 | 316..538 | 1115 | 100 | Plus |
| 2R | 25286936 | 2R | 15992778..15992933 | 23..178 | 780 | 100 | Plus |
| 2R | 25286936 | 2R | 15992992..15993129 | 178..315 | 690 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:02:51 has no hits.
BO26512.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:04:00 Download gff for
BO26512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8320-RA | 160..681 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:15 Download gff for
BO26512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8320-RA | 162..683 | 17..540 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:28 Download gff for
BO26512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8320-RA | 162..683 | 17..540 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:28 Download gff for
BO26512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 15992776..15992933 | 17..178 | 97 | -> | Plus |
| 2R | 15992993..15993129 | 179..315 | 100 | -> | Plus |
| 2R | 15993187..15993409 | 316..540 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:15 Download gff for
BO26512.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 11880281..11880438 | 17..178 | 97 | -> | Plus |
| arm_2R | 11880498..11880634 | 179..315 | 100 | -> | Plus |
| arm_2R | 11880692..11880914 | 316..540 | 99 | | Plus |
BO26512.pep Sequence
Translation from 16 to 556
> BO26512.pep
MAPQQKGKQGTKGAKQIVEENKTTLTFYRNMAIGCAAPALLLSFLVFEVT
KTSVFMHILSLLILGSSYQFMAFMSQAKYSESGALLDSGNDLNMEGGIAE
NVKDLIILTSGTLLLALISNYFWLVLLLAPIRAGWMLWGSVIQPWLSQRN
AQDDNPQVDEKKQKKMDRRMRRMRASFLDH
BO26512.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:24:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8320-PA | 174 | CG8320-PA | 1..174 | 1..174 | 884 | 100 | Plus |
