Clone BO26513 Report

Search the DGRC for BO26513

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:265
Well:13
Vector:pDNR-Dual
Associated Gene/TranscriptCG10031-RA
Protein status:BO26513.pep: Imported from assembly
Sequenced Size:421

Clone Sequence Records

BO26513.complete Sequence

421 bp assembled on 2010-07-01

GenBank Submission: KX796420

> BO26513.complete
GAAGTTATCAGTCGACATGCTTCTGCGGATGACCCAGTTTCTCTGCCTTG
CGGCACTCGTTTTGCTAAGTCTTATGCAACTTACGCAGGCAGTAGCCACT
CCCAATAATAATAATAATAATAATAACAATATTAAACCGAAGGCTGTGGT
TCAGGTGCAACCTGGAAATCCATCGGGAAACAAGCCTGCAGTTGCCACAA
CTACAATCAAACCACAGAGACTGGTACCAGATCCCAAATGCCTGCAGCCC
TTGGACGTTGGTCCATGCCGCATGAGCCTAGAAAGGTTCTACTACAACAA
GGATTCAAAAGCTTGCGAGACCTTCAAGTACGGAGGATGTCGAGGCAATG
ACAATCGTTGGGGATTCCGACAAACTTGTGAGGAGGCTTGTATTCCCAAA
AAGGCAAGCTTTCTAGACCAT

BO26513.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG10031-RA 390 CG10031-PA 1..387 17..403 1935 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:19
Subject Length Description Subject Range Query Range Score Percent Strand
CG10031-RA 577 CG10031-RA 53..439 17..403 1935 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:02:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3698827..3699040 230..17 1070 100 Minus
2L 23513712 2L 3698589..3698763 403..229 875 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:02:17 has no hits.

BO26513.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:46 Download gff for BO26513.complete
Subject Subject Range Query Range Percent Splice Strand
CG10031-RA 52..438 17..405 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:58 Download gff for BO26513.complete
Subject Subject Range Query Range Percent Splice Strand
CG10031-RA 53..439 17..405 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:16 Download gff for BO26513.complete
Subject Subject Range Query Range Percent Splice Strand
CG10031-RA 53..439 17..405 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:16 Download gff for BO26513.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3698586..3698761 231..405 98 <- Minus
2L 3698827..3699040 17..230 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:58 Download gff for BO26513.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3698586..3698761 231..405 98 <- Minus
arm_2L 3698827..3699040 17..230 100   Minus

BO26513.pep Sequence

Translation from 16 to 421

> BO26513.pep
MLLRMTQFLCLAALVLLSLMQLTQAVATPNNNNNNNNNIKPKAVVQVQPG
NPSGNKPAVATTTIKPQRLVPDPKCLQPLDVGPCRMSLERFYYNKDSKAC
ETFKYGGCRGNDNRWGFRQTCEEACIPKKASFLDH

BO26513.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:22:58
Subject Length Description Subject Range Query Range Score Percent Strand
CG10031-PA 129 CG10031-PA 1..129 1..129 699 100 Plus
CG3604-PB 132 CG3604-PB 36..110 56..130 159 40 Plus
CG3604-PA 132 CG3604-PA 36..110 56..130 159 40 Plus