BO26519.complete Sequence
859 bp assembled on 2010-07-01
GenBank Submission: KX797821
> BO26519.complete
GAAGTTATCAGTCGACATGTTGCAAAACAACGCGGTGCGCACTTTGCAAT
ACGACAGTGAGATCCGTGTGGCCCAGCAGCCAAGTCTCTCAGAACCGAGA
GTTTATGACTCCCATATCAGCATTACCTCACAACCCAGGCCGGAGGCTCC
ACGCATCCCGCTGCCAGTGCCAATTGCCACGGTTACGGGAAGCCGGACGC
TTATCCCACTTTCCGGATACGATTGCCTAGCAGATCTGCCGTCCGTACAT
ATTGAACAGACCTTTGAGCTTAACGATGCCCTAACAGGCGTCTCCTCGGA
GAATCGATATGTGGTGCGATCTCCACTGGGTGATGCCATTTTCGCGGCCA
ACGAGAGTTCCACAGAAAAAAATCGACTACTTTGGGGAGCTGGTCGACCC
TTTCAGATGCACCTGCTGGATAAAACGCACCAGGAAGCTCTGGTTTTTCG
CAAAAAACTAGCGATGGGATCCATGTGCTGCCAGGCAAAAAGTCTAGAAA
TTTGGATACCACCTGGTAATTTGCTGGGTAAAGTGGTGCAGTCGCCCACC
TTCATGCAGCCGGAGTTCTTTATCGAAGACGAAAGCACAGGACAACTAAC
ATTCTGTGTAGAGGGTCCTGTCGGTTTAGGATTCTGCTGCTTCAGTTTGC
CCAAAGATTGTTATTTTAAGATCCATTCGGGAGGCAATATGAGGGCTTCC
ATAGACCACAAATGGCTCGCAAGCAAGTCTCAGTACACCACAAATATATA
CTTTAGTGACGCCAAGCTAACCGCCAAGGAGCGGGCTTTGATACTGGGAT
CAGCCTTTCTACTGGAATATCTATTCTTCCAAACCCGCTTTGCAAGCTTT
CTAGACCAT
BO26519.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:02:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9084-RB | 828 | CG9084-PB | 1..825 | 17..841 | 4110 | 99.9 | Plus |
| CG9084-RC | 846 | CG9084-PC | 1..843 | 17..841 | 3895 | 97.7 | Plus |
| CG9084-RE | 438 | CG9084-PE | 1..435 | 407..841 | 2160 | 99.8 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:02:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9084-RB | 937 | CG9084-RB | 71..899 | 13..841 | 4115 | 99.8 | Plus |
| CG9084-RC | 955 | CG9084-RC | 71..917 | 13..841 | 3900 | 97.6 | Plus |
| CG9084-RE | 1253 | CG9084-RE | 476..1215 | 102..841 | 3685 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 11217754..11218146 | 670..278 | 1965 | 100 | Minus |
| 2R | 25286936 | 2R | 11218206..11218384 | 278..100 | 895 | 100 | Minus |
| 2R | 25286936 | 2R | 11217546..11217692 | 815..669 | 720 | 99.3 | Minus |
| 2R | 25286936 | 2R | 11219083..11219171 | 101..13 | 430 | 98.9 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:01:59 has no hits.
BO26519.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:40 Download gff for
BO26519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9084-RB | 52..871 | 22..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:47 Download gff for
BO26519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9084-RB | 80..899 | 22..843 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:07 Download gff for
BO26519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9084-RB | 80..899 | 22..843 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:07 Download gff for
BO26519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 11217547..11217690 | 671..814 | 99 | <- | Minus |
| 2R | 11217450..11217480 | 815..843 | 93 | <- | Minus |
| 2R | 11217754..11218145 | 279..670 | 100 | <- | Minus |
| 2R | 11218206..11218382 | 102..278 | 100 | <- | Minus |
| 2R | 11219083..11219162 | 22..101 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:47 Download gff for
BO26519.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 7104955..7104985 | 815..843 | 93 | <- | Minus |
| arm_2R | 7105052..7105195 | 671..814 | 99 | <- | Minus |
| arm_2R | 7105259..7105650 | 279..670 | 100 | <- | Minus |
| arm_2R | 7105711..7105887 | 102..278 | 100 | <- | Minus |
| arm_2R | 7106588..7106667 | 22..101 | 100 | | Minus |
BO26519.pep Sequence
Translation from 16 to 859
> BO26519.pep
MLQNNAVRTLQYDSEIRVAQQPSLSEPRVYDSHISITSQPRPEAPRIPLP
VPIATVTGSRTLIPLSGYDCLADLPSVHIEQTFELNDALTGVSSENRYVV
RSPLGDAIFAANESSTEKNRLLWGAGRPFQMHLLDKTHQEALVFRKKLAM
GSMCCQAKSLEIWIPPGNLLGKVVQSPTFMQPEFFIEDESTGQLTFCVEG
PVGLGFCCFSLPKDCYFKIHSGGNMRASIDHKWLASKSQYTTNIYFSDAK
LTAKERALILGSAFLLEYLFFQTRFASFLDH
BO26519.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:22:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9084-PB | 275 | CG9084-PB | 1..275 | 1..275 | 1440 | 100 | Plus |
| CG9084-PC | 281 | CG9084-PC | 1..281 | 1..275 | 1423 | 97.9 | Plus |
| CG9084-PE | 145 | CG9084-PE | 1..145 | 131..275 | 775 | 100 | Plus |
| CG9084-PD | 145 | CG9084-PD | 1..145 | 131..275 | 775 | 100 | Plus |
| scramb1-PB | 233 | CG32056-PB | 13..220 | 67..272 | 236 | 29.1 | Plus |
