BO26523.complete Sequence
1186 bp assembled on 2010-07-01
GenBank Submission: KX794613
> BO26523.complete
GAAGTTATCAGTCGACATGCAGCTGATTCTCGTGGCGACCTTGCTGTGCC
TGATAATCGGCAGCTGCAGTGCATCCATAAGTGGGCCGTTCATCTTCTGG
GGTCACTCCAGGGTATCCAGTCAGCAAACCCAGGCCTTGGTGGAATCGAG
CAGCAGGGAGCTACCGCTGACGCAACTTTTCACAGAGGCCAAGGCAATTG
TGGTCTTCGTACGCAACACTACCAACCGACTGGAGGGCACCAGGTATCCC
AAGTTCCAGAATCTCGTTAAGAGCGGAGCCTGGACCTATCTGCCACAGAG
GAGTCTGGCGGCTGAACCCTTCGGCTTGAATGCCAACATTGAAGTGGTGA
GTCTCTCGGGACACGGAGAAGAGGATGACTCTGAGATTCTGTTGGCCTAC
AACGAAGCCGTGAATACCTACGGTCGCGGTGAAGTGCTGGGCATCTTGGG
CAGCCGTGAGGAGGAGGCCCACTTCCTGGCCAAGAGGGAGGCTGCTCCAG
GGGGTGAGGAGGAGGAGAAAGCAAAGGCTGCTGAAGGTTCCGAGGAGACT
GAGGCCAGTTTCATCTACGTGGCCGAGGGCAACAAAGCGGTGCTTAGTCT
CAACGGACCCCTGGAGCTCCGGGTGACCAATGACACTCTGAAGCTGGAGG
AGCACATCAAGCAGATTACCTTCGATGATCAGCGGGCCAAGGGATACGGT
CGATTGAGCATCACTTTCATGCATTCAGGGGAAAAGTGCACGCTGCGTTT
TAAATTCTCCCTCATTCGGGGATCCTGGACGTTGCGCAATGTGGAGGTGG
AGTACCGGGAGCTGAAGAGTGTCCTGGTAGCACGTGGTGATGAGTACACA
CTGCCCTCCGCACCGCTGGGATTCTCGTACCGCTGCTCAGCGGAAAGCGT
TAACTTCCTGAATCCCGCCCGGAATGAGACAATCCAGAGTCTCCTCCTCA
GTGATTTCCAGGTGCAGCCGTGGCTCAACGGACGACCGGAATATGGTGAG
GTGTACGACTGCATAGGATTCGTGTCGGCACCCATCCTGGCCGGACTGTT
CGTCGTGACCCTGCTCCTTGGCATCCTGGGACTCGGCATATCCGCCATGC
TCAGCATGCACACGCCCAACCGATTCGAGAGTTCGCGCAGCAAGCAGTTG
ACCTTCACCGTACAGGAGGCAAGCTTTCTAGACCAT
BO26523.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:05:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31030-RA | 1155 | CG31030-PA | 1..1152 | 17..1168 | 5745 | 99.9 | Plus |
| CG31030-RB | 1272 | CG31030-PB | 1..1130 | 17..1146 | 5635 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:05:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31030-RA | 1671 | CG31030-RA | 59..1210 | 17..1168 | 5745 | 99.9 | Plus |
| CG31030-RB | 1616 | CG31030-RB | 59..1188 | 17..1146 | 5635 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:05:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 30165153..30165977 | 1168..344 | 4125 | 100 | Minus |
| 3R | 32079331 | 3R | 30166032..30166361 | 346..17 | 1635 | 99.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:05:50 has no hits.
BO26523.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 17:43:02 Download gff for
BO26523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31030-RA | 70..1221 | 17..1170 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:10:43 Download gff for
BO26523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31030-RA | 59..1210 | 17..1170 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:21:38 Download gff for
BO26523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31030-RA | 59..1210 | 17..1170 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:21:38 Download gff for
BO26523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 30165151..30165977 | 344..1170 | 99 | <- | Minus |
| 3R | 30166035..30166361 | 17..343 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:10:43 Download gff for
BO26523.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 25990873..25991699 | 344..1170 | 99 | <- | Minus |
| arm_3R | 25991757..25992083 | 17..343 | 99 | | Minus |
BO26523.pep Sequence
Translation from 16 to 1186
> BO26523.pep
MQLILVATLLCLIIGSCSASISGPFIFWGHSRVSSQQTQALVESSSRELP
LTQLFTEAKAIVVFVRNTTNRLEGTRYPKFQNLVKSGAWTYLPQRSLAAE
PFGLNANIEVVSLSGHGEEDDSEILLAYNEAVNTYGRGEVLGILGSREEE
AHFLAKREAAPGGEEEEKAKAAEGSEETEASFIYVAEGNKAVLSLNGPLE
LRVTNDTLKLEEHIKQITFDDQRAKGYGRLSITFMHSGEKCTLRFKFSLI
RGSWTLRNVEVEYRELKSVLVARGDEYTLPSAPLGFSYRCSAESVNFLNP
ARNETIQSLLLSDFQVQPWLNGRPEYGEVYDCIGFVSAPILAGLFVVTLL
LGILGLGISAMLSMHTPNRFESSRSKQLTFTVQEASFLDH
BO26523.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:27:39
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31030-PA | 384 | CG31030-PA | 1..384 | 1..384 | 1948 | 100 | Plus |
| CG31030-PB | 423 | CG31030-PB | 1..377 | 1..377 | 1914 | 100 | Plus |
| VhaAC45-PA | 379 | CG8029-PA | 273..373 | 281..379 | 153 | 35 | Plus |
| VhaAC45-PB | 379 | CG8029-PB | 273..373 | 281..379 | 153 | 35 | Plus |
