Clone BO26525 Report

Search the DGRC for BO26525

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:265
Well:25
Vector:pDNR-Dual
Associated Gene/TranscriptCG14778-RA
Protein status:BO26525.pep: Imported from assembly
Sequenced Size:592

Clone Sequence Records

BO26525.complete Sequence

592 bp assembled on 2010-07-01

GenBank Submission: KX793842

> BO26525.complete
GAAGTTATCAGTCGACATGGCGGGCCCACTTTTGTGGCAAAACTTCAAGG
TGTTCGTCACCCGCTACCCGATTATGCGCGGCATGATATCGTACAGCCTG
ATCTGGCCCACGGGCAGCCTCATCCAGCAAACGGTTGAGGGCAGGCGCTG
GGGCACCTACGACTGGTGGCGCGTGCTCCGGTTCAGCATGTACGGTGGTC
TGTTTGTTGCTCCTACCCTCTACGGATGGGTCAAGATTTCCAGCGCCATG
TGGCCGCAGACATCGTTGAGGACGGGCGTCATTAAGGCGGCGGTGGAGAC
GATCTCGTACACCCCCGGCGCGATGACCTGCTTCTACTTTATCATGAGCC
TCCTGGAGTCCAAGACGGTGGAGCAGGCGGTAGCCGAGGTCGGCAAGAAA
TTCCTGCCCACGTACAAGGTGGCTCTGTCCGTATGGCCACTGGTGGCCAC
CATCAACTTCACCCTGATCCCCGAGCGCAACCGGGTGCCATTCATCAGCG
CGTGCAGCCTGTGCTGGACCTGCTTCTTGGCCTACATGAAGCACCTGGAG
CACCACGAGGTGGACGGGGCCATTGCAAGCTTTCTAGACCAT

BO26525.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG14778-RA 561 CG14778-PA 1..558 17..574 2790 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG14778-RA 753 CG14778-RA 139..696 17..574 2790 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:45
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1470155..1470341 234..420 935 100 Plus
X 23542271 X 1470400..1470557 417..574 790 100 Plus
X 23542271 X 1469818..1469954 17..153 685 100 Plus
X 23542271 X 1470014..1470097 152..235 420 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:01:45 has no hits.

BO26525.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:36 Download gff for BO26525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14778-RA 139..696 17..576 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:41 Download gff for BO26525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14778-RA 139..696 17..576 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:59 Download gff for BO26525.complete
Subject Subject Range Query Range Percent Splice Strand
CG14778-RA 139..696 17..576 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:59 Download gff for BO26525.complete
Subject Subject Range Query Range Percent Splice Strand
X 1470157..1470339 236..418 100 -> Plus
X 1470402..1470557 419..576 98   Plus
X 1470015..1470097 153..235 100 -> Plus
X 1469818..1469953 17..152 100 -> Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:41 Download gff for BO26525.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1364435..1364590 419..576 98   Plus
arm_X 1363851..1363986 17..152 100 -> Plus
arm_X 1364048..1364130 153..235 100 -> Plus
arm_X 1364190..1364372 236..418 100 -> Plus

BO26525.pep Sequence

Translation from 16 to 592

> BO26525.pep
MAGPLLWQNFKVFVTRYPIMRGMISYSLIWPTGSLIQQTVEGRRWGTYDW
WRVLRFSMYGGLFVAPTLYGWVKISSAMWPQTSLRTGVIKAAVETISYTP
GAMTCFYFIMSLLESKTVEQAVAEVGKKFLPTYKVALSVWPLVATINFTL
IPERNRVPFISACSLCWTCFLAYMKHLEHHEVDGAIASFLDH

BO26525.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG14778-PA 186 CG14778-PA 1..186 1..186 1003 100 Plus
CG14777-PF 196 CG14777-PF 23..185 17..181 544 58.8 Plus
CG14777-PC 196 CG14777-PC 23..185 17..181 544 58.8 Plus
CG14777-PE 196 CG14777-PE 23..185 17..181 544 58.8 Plus
CG14777-PD 196 CG14777-PD 23..185 17..181 544 58.8 Plus