BO26528.complete Sequence
397 bp assembled on 2010-07-01
GenBank Submission: KX799998
> BO26528.complete
GAAGTTATCAGTCGACATGAAACAGTACCTGGTGCTTGCCCTCGTCTTTG
CGGCCATTCTGGCCATGATCAGCGGCCATCCTCTGGAGGAACAAAAGATC
ACGCTGGAAGATGCTGAAGCACAGCCGGGAATCGATGATGGCACTGGAGT
TAGGGCCGCTCGTCACTTTGGCGGCGGCTTTGGCCGCGGAGGATATTGCT
GTGGAGGAGGCGGTGGCTTCCGGCGCGGTGGTTTCGGTGGCGGTGGTTAC
GGTGGCGGTGGTTACGGTGGCGGTGGCTATCCAGGTGGCGGCTTTGGCGG
ATATCCCAGAGGTGGATTTGGCGGCGGCAGTGCATCAGCATCGGCGTCAG
CTTCAGCCAGTTCCAGTTGGGGACGTAAAGCAAGCTTTCTAGACCAT
BO26528.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Listericin-RA | 366 | CG9080-PA | 1..363 | 17..379 | 1815 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Listericin-RA | 450 | CG9080-RA | 29..391 | 17..379 | 1815 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 11241804..11242166 | 379..17 | 1815 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:01:39 has no hits.
BO26528.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:33 Download gff for
BO26528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG9080-RA | 30..392 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:36 Download gff for
BO26528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Listericin-RA | 29..391 | 17..381 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:56 Download gff for
BO26528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Listericin-RA | 29..391 | 17..381 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:56 Download gff for
BO26528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 11241802..11242166 | 17..381 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:36 Download gff for
BO26528.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 7129307..7129671 | 17..381 | 99 | | Minus |
BO26528.pep Sequence
Translation from 16 to 397
> BO26528.pep
MKQYLVLALVFAAILAMISGHPLEEQKITLEDAEAQPGIDDGTGVRAARH
FGGGFGRGGYCCGGGGGFRRGGFGGGGYGGGGYGGGGYPGGGFGGYPRGG
FGGGSASASASASASSSWGRKASFLDH
BO26528.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Listericin-PA | 121 | CG9080-PA | 1..121 | 1..121 | 660 | 100 | Plus |
CG9757-PB | 127 | CG9757-PB | 1..109 | 1..103 | 201 | 47.7 | Plus |
CG9757-PA | 127 | CG9757-PA | 1..109 | 1..103 | 201 | 47.7 | Plus |
CG7294-PA | 127 | CG7294-PA | 1..105 | 1..119 | 198 | 44.4 | Plus |
CG17108-PA | 342 | CG17108-PA | 250..337 | 37..119 | 196 | 55.9 | Plus |
CG7294-PA | 127 | CG7294-PA | 54..123 | 51..119 | 148 | 51.4 | Plus |