BO26530.complete Sequence
814 bp assembled on 2010-07-01
GenBank Submission: KX794932
> BO26530.complete
GAAGTTATCAGTCGACATGGAGCAACCAGCAACTGGAGGCGCCGCTGTCC
AACCGGGCGTGTCCCCAGCGCACATCCACGACACGGATCAGCTCCTGGAC
CCCGTCCTCTTCTCCAACGACAATGGAAGCTACAAGCTAAATACAGTGCC
CGCATTTAGCCTTCATCTGGTTATCTCCACTGCAATCTCCATTGTGGGGA
TCGTACTTGCAGCCTCGTTTCCAACCGATCGGCGCTGCGATGCATACTTT
ATAATGCTCTACCTACGGGCCACCTTCTGGGTCATCACATATCTCTTCGA
TCACTTCGTAAAGAAGCAACACGACAATCTACGCATGCAGGGCTATCACG
ACTTTCACCGCGAGACTAACATGCAGAAGGGGATTCCCCTTCAGCTGGTA
TCCCTGTGGAACTCCATGCTGCTTGCTGTCCAGGCCCTAATCCACCACTT
CTATGCGGAGAACTTTTGGGAACATTGCGCCGCCGGGTGGCTGTCGCCGG
TCAGCTATGTGACCGCCTTCACCGTGGCCGAGAATCTGGTGCTGGCCGTT
TCCCACAGCTTATATATTGACAAGGTGCGTAAGTTCAACAGCGCCAAGCT
GGCTCCGGATGTTTTGCGTGGTGCGGACCGCGCCGGCGGTTCCCTGGGCC
TCATGCAACCAGGAGGCGACACAGAAGAGCTTCTGGAGAAGCAGGCCGAC
CTTATCGCCTATCTGCGTGACCATACACACAAGCTCAACCAGAAACTGCA
TCAAATGCAGACCAACGTGCGACCAGTGAGGGCACCACAAATTCCTGCAA
GCTTTCTAGACCAT
BO26530.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7523-RA | 783 | CG7523-PA | 1..780 | 17..796 | 3900 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:33
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7523-RA | 1134 | CG7523-RA | 99..878 | 17..796 | 3900 | 100 | Plus |
| CG14322-RE | 5857 | CG14322-RE | 5272..5499 | 796..569 | 1140 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:30
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 17670066..17670342 | 569..293 | 1385 | 100 | Minus |
| 3R | 32079331 | 3R | 17669400..17669627 | 796..569 | 1140 | 100 | Minus |
| 3R | 32079331 | 3R | 17670655..17670797 | 159..17 | 715 | 100 | Minus |
| 3R | 32079331 | 3R | 17670405..17670540 | 292..157 | 680 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:01:31 has no hits.
BO26530.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:32 Download gff for
BO26530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7523-RA | 98..877 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:31 Download gff for
BO26530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7523-RA | 99..878 | 17..798 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:53 Download gff for
BO26530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG7523-RA | 99..878 | 17..798 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:53 Download gff for
BO26530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 17669398..17669626 | 570..798 | 99 | <- | Minus |
| 3R | 17670066..17670342 | 293..569 | 100 | <- | Minus |
| 3R | 17670405..17670537 | 160..292 | 100 | <- | Minus |
| 3R | 17670655..17670797 | 17..159 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:31 Download gff for
BO26530.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 13495120..13495348 | 570..798 | 99 | <- | Minus |
| arm_3R | 13495788..13496064 | 293..569 | 100 | <- | Minus |
| arm_3R | 13496127..13496259 | 160..292 | 100 | <- | Minus |
| arm_3R | 13496377..13496519 | 17..159 | 100 | | Minus |
BO26530.pep Sequence
Translation from 16 to 814
> BO26530.pep
MEQPATGGAAVQPGVSPAHIHDTDQLLDPVLFSNDNGSYKLNTVPAFSLH
LVISTAISIVGIVLAASFPTDRRCDAYFIMLYLRATFWVITYLFDHFVKK
QHDNLRMQGYHDFHRETNMQKGIPLQLVSLWNSMLLAVQALIHHFYAENF
WEHCAAGWLSPVSYVTAFTVAENLVLAVSHSLYIDKVRKFNSAKLAPDVL
RGADRAGGSLGLMQPGGDTEELLEKQADLIAYLRDHTHKLNQKLHQMQTN
VRPVRAPQIPASFLDH
BO26530.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:46
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG7523-PA | 260 | CG7523-PA | 1..260 | 1..260 | 1367 | 100 | Plus |
