BO26534.complete Sequence
574 bp assembled on 2010-07-01
GenBank Submission: KX798655
> BO26534.complete
GAAGTTATCAGTCGACATGTCGCTGGTGGCAGATTATAGCGACTCCTCCG
AATCCGATGAAGACAGCAGTGGCCAATTTTCCGAAGACGGGGAAACAAAG
AGTGCGGCACCAGCCAAAAATGAGAAGACTCCTCCTCCCAAGTTGCCCAG
TGCTAGCCAAGCTTTTTCCCAAGGAGCTGGAAAGGGAGATGTGTTTAACA
ATCCCTTCCTGGAGGCCGAGCTGCATAAAACCGCGTCGCTGGAGCGGCAC
GTGAAGATGGTCGACAACGACGCGCACCAAAAGTTGAAGAATGGCCGTAA
GATTTGCTGGAACTTTAGAAGGGGACGCTGCCGCTTTGGCACCAGTTGCC
AGTATGCTCACGATTCCGACTTGTCGGTGGATGAGGCGGCGGAGAAGAGT
GCATTACCGGATCAATCAGTGCCTGTGGTCGTAGAAGCTGCACCGGGTAA
TTTCAACAGGCGTAAGCGCCCGGGTCTGGGCGATGCTCTGGAGCCGGGCA
AACGGGTTATGAAGTCCTACAAACAGCAAAATCCGCAAAATCCATTTGCC
CGGCGTGCAAGCTTTCTAGACCAT
BO26534.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42382-RA | 543 | CG42382-PA | 1..540 | 17..556 | 2700 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:53
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42382-RA | 885 | CG42382-RA | 46..585 | 17..556 | 2700 | 100 | Plus |
| Rad51C-RB | 1918 | CG2412-RB | 1114..1569 | 556..101 | 2280 | 100 | Minus |
| Rad51C-RB | 1918 | CG2412-RB | 1626..1711 | 102..17 | 430 | 100 | Minus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 9166866..9167321 | 556..101 | 2280 | 100 | Minus |
| 2R | 25286936 | 2R | 9167378..9167463 | 102..17 | 430 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:01:52 has no hits.
BO26534.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:38 Download gff for
BO26534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42382-RA | 56..595 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:44 Download gff for
BO26534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42382-RA | 46..585 | 17..558 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:03 Download gff for
BO26534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG42382-RA | 46..585 | 17..558 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:03 Download gff for
BO26534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 9166864..9167319 | 103..558 | 99 | <- | Minus |
| 2R | 9167378..9167463 | 17..102 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:44 Download gff for
BO26534.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 5054369..5054824 | 103..558 | 99 | <- | Minus |
| arm_2R | 5054883..5054968 | 17..102 | 100 | | Minus |
BO26534.pep Sequence
Translation from 16 to 574
> BO26534.pep
MSLVADYSDSSESDEDSSGQFSEDGETKSAAPAKNEKTPPPKLPSASQAF
SQGAGKGDVFNNPFLEAELHKTASLERHVKMVDNDAHQKLKNGRKICWNF
RRGRCRFGTSCQYAHDSDLSVDEAAEKSALPDQSVPVVVEAAPGNFNRRK
RPGLGDALEPGKRVMKSYKQQNPQNPFARRASFLDH
BO26534.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:22:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG42382-PA | 180 | CG8016-PA | 1..180 | 1..180 | 947 | 100 | Plus |
