BO26539.complete Sequence
601 bp assembled on 2010-07-01
GenBank Submission: KX796657
> BO26539.complete
GAAGTTATCAGTCGACATGGCCGGGGAATATATCATACTGGAGAACTCGT
CGACTTATCCGGGCTTCCATTCCAGTTCCAACGGATTGGCGAATGGCATG
TACCGCTCCGCCCAGCGCATCTCCACCGATCGCCTGGTCCTGCTCATTCT
GCTGGTGAGCACCACGGTGATCGGGCTGTTTGCCTACTGGGATGTAATGG
TGCTCAACGCCGGCGCACTGCCACTGTCCAGAGGCACTAGCTCTGTTGAT
TACATGGAGCCTGGACTGCGCAACGAAACCCTGGCCGAGAAGATGCATCG
GGAGGTGAGAGTCCTGTGCTGGGTGCTCACCACACCCAAATACCACAAGA
CCCGGGCCATTCACGTTTTGCGAACGTGGGGCAAACGCTGCAATAAGATC
TACTTCATGACCTCTGAGCCGGATGACGAGCTGCCCACCGTTGTGCTGAC
CAAGCCGGACCGATACGAGATGCTGTGGGGCAAGACCAAAGAGGCCTTTG
TCCACATCCACGAGCAGATGCGCCACGAGGCGGATTGGTTCATAAAGGCG
GACGACGACACGTATGTGAAAGATTCAGATTCTGCAAGCTTTCTAGACCA
T
BO26539.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:20
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-RE | 1122 | CG7440-PE | 1..545 | 17..561 | 2725 | 100 | Plus |
| tgy-RC | 1122 | CG7440-PC | 1..545 | 17..561 | 2725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-RE | 1590 | CG7440-RE | 13..557 | 17..561 | 2725 | 100 | Plus |
| tgy-RC | 1319 | CG7440-RC | 13..557 | 17..561 | 2725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:01:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19126738..19127304 | 583..17 | 2835 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:01:19 has no hits.
BO26539.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:27 Download gff for
BO26539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RD | 10..576 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:24 Download gff for
BO26539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RD | 10..576 | 17..585 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:47 Download gff for
BO26539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tgy-RC | 13..560 | 17..564 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:47 Download gff for
BO26539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19126736..19127304 | 17..585 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:24 Download gff for
BO26539.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19020769..19021337 | 17..585 | 99 | | Minus |
BO26539.pep Sequence
Translation from 16 to 601
> BO26539.pep
MAGEYIILENSSTYPGFHSSSNGLANGMYRSAQRISTDRLVLLILLVSTT
VIGLFAYWDVMVLNAGALPLSRGTSSVDYMEPGLRNETLAEKMHREVRVL
CWVLTTPKYHKTRAIHVLRTWGKRCNKIYFMTSEPDDELPTVVLTKPDRY
EMLWGKTKEAFVHIHEQMRHEADWFIKADDDTYVKDSDSASFLDH
BO26539.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:41
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tgy-PE | 373 | CG7440-PE | 1..184 | 1..184 | 974 | 99.5 | Plus |
| tgy-PC | 373 | CG7440-PC | 1..184 | 1..184 | 974 | 99.5 | Plus |
| C1GalTA-PA | 388 | CG9520-PA | 88..185 | 86..183 | 321 | 57.1 | Plus |
| C1GalTA-PC | 388 | CG9520-PC | 88..185 | 86..183 | 321 | 57.1 | Plus |
| C1GalTA-PB | 388 | CG9520-PB | 88..185 | 86..183 | 321 | 57.1 | Plus |
