Clone BO26550 Report

Search the DGRC for BO26550

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:265
Well:50
Vector:pDNR-Dual
Associated Gene/TranscriptCG12106-RA
Protein status:BO26550.pep: Imported from assembly
Sequenced Size:667

Clone Sequence Records

BO26550.complete Sequence

667 bp assembled on 2010-07-01

GenBank Submission: KX795184

> BO26550.complete
GAAGTTATCAGTCGACATGGACACATTGCCGGGAAGTTCCTCCGCCCTGA
GCACAGACGACGAGCAAACTGCCCTGATTTCCCCCACTGTGGTGGCCGGC
TTAAAGAACCTGGGTGCCATCATTTCGCTGCCACTCACCAAACTGCTCAT
TGCCAATTCCTTGAAACTGACGCTCCATCCAGATGCCACCATTGCTCCGG
TGCCCGAGCTGTATGCCAAGAACGCCGCCTGCGCCAAACAGAGCGAGTAC
GCGGTGGTCACCCTCTTCGCCCTGGGCACCAAGCACGGCTGGGATGGCCT
TCAATTGCGCCAGCAGCTGGAGCAACTCAACCTCGATGCAGCTGCCGTCG
ACGAGCTGAGTCGCGTTTACGAGGACAGCCGCAAGGATCTAATTCTCCGC
CAACTGCAAATAGGCCATAGCTTTCCGCACATTACCGACATCCAGTGGCG
CATCGTGTGCGACGTGAAGTCTTCCACCTCGGACTGCAGCACGGGCGCGG
CCTGCTTCCACATCAATCTGGGCAACTTTCGGCAGAGCAGCGGCGAGCGG
GTGACCATCGTTGAGTTTGTCTGCAATGCCGAGGAGCTGCAGTCGCTAAT
CAATCGTCTCAAGGAGATCGAGCGGCACTGCCAACAGATGGCCGTGGTCG
CAAGCTTTCTAGACCAT

BO26550.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:01:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG12106-RA 636 CG12106-PA 1..633 17..649 3165 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:01:03
Subject Length Description Subject Range Query Range Score Percent Strand
CG12106-RA 1372 CG12106-RA 137..771 15..649 3175 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:59
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 9194272..9194732 189..649 2305 100 Plus
X 23542271 X 9194034..9194207 15..188 870 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:01:00 has no hits.

BO26550.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:23 Download gff for BO26550.complete
Subject Subject Range Query Range Percent Splice Strand
CG12106-RA 95..727 17..651 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:17 Download gff for BO26550.complete
Subject Subject Range Query Range Percent Splice Strand
CG12106-RA 139..771 17..651 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:39 Download gff for BO26550.complete
Subject Subject Range Query Range Percent Splice Strand
CG12106-RA 139..771 17..651 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:39 Download gff for BO26550.complete
Subject Subject Range Query Range Percent Splice Strand
X 9194036..9194207 17..188 100 -> Plus
X 9194272..9194732 189..651 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:17 Download gff for BO26550.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 9088069..9088240 17..188 100 -> Plus
arm_X 9088305..9088765 189..651 99   Plus

BO26550.pep Sequence

Translation from 16 to 667

> BO26550.pep
MDTLPGSSSALSTDDEQTALISPTVVAGLKNLGAIISLPLTKLLIANSLK
LTLHPDATIAPVPELYAKNAACAKQSEYAVVTLFALGTKHGWDGLQLRQQ
LEQLNLDAAAVDELSRVYEDSRKDLILRQLQIGHSFPHITDIQWRIVCDV
KSSTSDCSTGAACFHINLGNFRQSSGERVTIVEFVCNAEELQSLINRLKE
IERHCQQMAVVASFLDH

BO26550.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:34
Subject Length Description Subject Range Query Range Score Percent Strand
CG12106-PA 211 CG12106-PA 1..211 1..211 1070 100 Plus