BO26551.complete Sequence
2752 bp assembled on 2010-08-02
GenBank Submission: KX796475
> BO26551.complete
GAAGTTATCAGTCGACATGGGCGAAGAACTCCCGATATTGAAGGGCATAC
TTAAAGGCAACGTCAACTATCACAATGCGCCTGTGCGTTTTGGACGCGTG
CCGAAGCGCGAAAAGGCGCGTATCCTGGCGGCCATGCAACAGAGCACCCA
GAATCGCGGCCAGCAGCGAGCCCTCGCCACCGAGCTGGATGACCAGCCAC
GCCTCCTCGCCGCCGTGCTGCGCGCCCACCTCGAGACCTGTGAGTTCACC
AAGGAGAAGGTCTCGGCGATGCGGCAGCGGGCGCGGGATTGCCCCTCCTA
CTCCATGCCCACACTTCTGGCCTGTCCGCTGAACCCCGCCCCTGAACTGC
AATCGGAGCAGGAGTTCTCGCAGCGTTTCGCCCACGTAATTCGCGGCGTG
ATCGACTTTGCCGGCATGATTCCCGGCTTCCAGCTGCTCACCCAGGACGA
TAAGTTCACGCTCCTGAAGGCGGGACTCTTCGACGCCCTGTTTGTGCGCC
TGATCTGCATGTTTGACTCGTCGATAAACTCAATCATCTGTCTAAATGGC
CAGGTGATGCGACGGGATGCGATCCAGAACGGAGCCAATGCCCGCTTCCT
GGTGGACTCCACCTTCAATTTCGCGGAGCGCATGAACTCGATGAACCTGA
CAGATGCCGAGATAGGCCTGTTCTGCGCCATCGTTCTGATTACGCCGGAT
CGCCCCGGTTTGCGCAACCTGGAGCTGATCGAGAAGATGTACTCGCGACT
CAAGGGCTGCCTGCAGTACATTGTCGCCCAGAATAGGCCCGATCAGCCCG
AGTTCCTGGCCAAGTTGCTGGAGACGATGCCCGATCTGCGCACCCTGAGC
ACCCTGCACACCGAGAAACTGGTAGTTTTCCGCACCGAGCACAAGGAGCT
GCTGCGCCAGCAGATGTGGTCCATGGAGGACGGCAACAACAGCGATGGCC
AGCAGAACAAGTCGCCCTCGGGCAGCTGGGCGGATGCCATGGACGTGGAG
GCGGCCAAGAGTCCGCTTGGCTCGGTATCGAGCACTGAGTCCGCCGACCT
GGACTACGGCAGTCCGAGCAGTTCGCAGCCACAGGGCGTGTCTCTGCCCT
CGCCGCCTCAGCAACAGCCCTCGGCTCTGGCCAGCTCGGCTCCTCTGCTG
GCGGCCACCCTCTCCGGAGGATGTCCCCTGCGCAACCGGGCCAATTCCGG
CTCCAGCGGTGACTCCGGAGCAGCTGAGATGGATATCGTTGGCTCGCACG
CACATCTCACCCAGAACGGGCTGACAATCACGCCGATTGTGCGACACCAG
CAGCAGCAACAACAGCAGCAGCAGATCGGAATACTCAATAATGCGCATTC
CCGCAACTTGAATGGGGGACACGCGATGTGCCAGCAACAGCAGCAGCACC
CACAACTGCACCACCACTTGACAGCCGGAGCTGCCCGCTACAGAAAGCTA
GATTCGCCCACGGATTCGGGCATTGAGTCGGGCAACGAGAAGAACGAGTG
CAAGGCGGTGAGTTCGGGGGGAAGTTCCTCGTGCTCCAGTCCGCGTTCCA
GTGTGGATGATGCGCTGGACTGCAGCGATGCCGCCGCCAATCACAATCAG
GTGGTGCAGCATCCGCAGCTGAGTGTGGTGTCCGTGTCACCAGTTCGCTC
GCCCCAGCCCTCCACCAGCAGCCATCTGAAGCGACAGATTGTGGAGGATA
TGCCCGTGCTGAAGCGCGTGCTGCAGGCTCCCCCTCTGTACGATACCAAC
TCGCTGATGGACGAGGCCTACAAGCCGCACAAGAAATTCCGGGCCCTGCG
GCATCGCGAGTTCGAGACCGCCGAGGCGGATGCCAGCAGTTCCACTTCCG
GCTCGAACAGCCTGAGTGCCGGCAGTCCGCGACAGAGTCCAGTCCCGAAC
AGTGTGGCCACGCCCCCGCCATCGGCGGCCAGCGCCGCCGCAGGTAATCC
CGCCCAGAGCCAGCTGCACATGCACCTGACCCGCAGCAGCCCCAAGGCCT
CGATGGCCAGCTCGCACTCGGTGCTGGCCAAGTCTCTCATGGCCGAGCCG
CGCATGACGCCCGAGCAGATGAAGCGCAGCGATATTATCCAAAACTACTT
GAAGCGCGAGAACAGCACAGCAGCCAGCAGCACCACCAATGGCGTGGGCA
ACCGCAGTCCCAGCAGCAGCTCCACACCGCCGCCATCGGCGGTCCAGAAT
CAGCAGCGTTGGGGCAGCAGCTCGGTGATCACCACCACCTGCCAGCAGCG
CCAGCAGTCCGTGTCGCCGCACAGCAACGGTTCCAGCTCCAGTTCGAGCT
CTAGCTCCAGCTCCAGTTCGTCATCCTCCTCCACATCCTCCAACTGCAGC
TCCAGCTCGGCCAGCAGCTGCCAGTATTTCCAGTCGCCGCACTCCACCAG
CAACGGCACCAGTGCACCGGCGAGCTCCAGTTCGGGATCGAACAGCGCCA
CGCCCCTGCTGGAACTGCAGGTGGACATTGCTGACTCGGCGCAGCCTCTC
AATTTGTCCAAGAAATCGCCCACGCCGCCGCCCAGCAAGCTGCACGCTCT
GGTGGCCGCCGCCAATGCCGTTCAAAGGTATCCCACATTGTCCGCCGACG
TCACAGTGACAGCCTCCAATGGCGGTCCTCCGTCGGCGGCGGCGAGTCCG
GCGCCCAGCAGCAGTCCGCCGGCGAGTGTGGGCTCCCCCAATCCGGGCCT
GAGCGCCGCCGTGCACAAGGTAATGCTGGAGGCGGCAAGCTTTCTAGACC
AT
BO26551.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:41:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip75B-RD | 2721 | CG8127-PD | 1..2718 | 17..2734 | 13590 | 100 | Plus |
| Eip75B-RG | 2976 | CG8127-PG | 320..2973 | 81..2734 | 13270 | 100 | Plus |
| Eip75B-RF | 4239 | CG8127-PF | 1583..4236 | 81..2734 | 13270 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:41:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip75B-RD | 3750 | CG8127-RD | 747..3464 | 17..2734 | 13590 | 100 | Plus |
| Eip75B-RG | 3876 | CG8127-RG | 937..3590 | 81..2734 | 13270 | 100 | Plus |
| Eip75B-RF | 8236 | CG8127-RF | 2892..5545 | 81..2734 | 13270 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:41:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 17953644..17955050 | 2734..1328 | 7035 | 100 | Minus |
| 3L | 28110227 | 3L | 17955214..17956229 | 1329..314 | 5065 | 99.9 | Minus |
| 3L | 28110227 | 3L | 17959381..17959620 | 320..81 | 1200 | 100 | Minus |
| 3L | 28110227 | 3L | 17961005..17961068 | 80..17 | 320 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:41:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..6873 | 1295..1416 | 171 | 64.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6779..6914 | 1295..1431 | 159 | 60.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6823..6984 | 1291..1458 | 150 | 61.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2293..2336 | 1281..1324 | 139 | 79.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2391..2503 | 1295..1416 | 128 | 63.4 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1163 | 1295..1415 | 123 | 63.6 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2318..2381 | 1381..1446 | 117 | 68.2 | Plus |
BO26551.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 10:19:49 Download gff for
BO26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..3464 | 17..2736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:51 Download gff for
BO26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..3464 | 17..2736 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:54 Download gff for
BO26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Eip75B-RD | 747..3464 | 17..2736 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:54 Download gff for
BO26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 17953642..17955049 | 1329..2736 | 99 | <- | Minus |
| 3L | 17955215..17956223 | 320..1328 | 100 | <- | Minus |
| 3L | 17959382..17959620 | 81..319 | 100 | <- | Minus |
| 3L | 17961005..17961068 | 17..80 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:51 Download gff for
BO26551.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 17946742..17948149 | 1329..2736 | 99 | <- | Minus |
| arm_3L | 17948315..17949323 | 320..1328 | 100 | <- | Minus |
| arm_3L | 17952482..17952720 | 81..319 | 100 | <- | Minus |
| arm_3L | 17954105..17954168 | 17..80 | 100 | | Minus |
BO26551.pep Sequence
Translation from 16 to 2752
> BO26551.pep
MGEELPILKGILKGNVNYHNAPVRFGRVPKREKARILAAMQQSTQNRGQQ
RALATELDDQPRLLAAVLRAHLETCEFTKEKVSAMRQRARDCPSYSMPTL
LACPLNPAPELQSEQEFSQRFAHVIRGVIDFAGMIPGFQLLTQDDKFTLL
KAGLFDALFVRLICMFDSSINSIICLNGQVMRRDAIQNGANARFLVDSTF
NFAERMNSMNLTDAEIGLFCAIVLITPDRPGLRNLELIEKMYSRLKGCLQ
YIVAQNRPDQPEFLAKLLETMPDLRTLSTLHTEKLVVFRTEHKELLRQQM
WSMEDGNNSDGQQNKSPSGSWADAMDVEAAKSPLGSVSSTESADLDYGSP
SSSQPQGVSLPSPPQQQPSALASSAPLLAATLSGGCPLRNRANSGSSGDS
GAAEMDIVGSHAHLTQNGLTITPIVRHQQQQQQQQQIGILNNAHSRNLNG
GHAMCQQQQQHPQLHHHLTAGAARYRKLDSPTDSGIESGNEKNECKAVSS
GGSSSCSSPRSSVDDALDCSDAAANHNQVVQHPQLSVVSVSPVRSPQPST
SSHLKRQIVEDMPVLKRVLQAPPLYDTNSLMDEAYKPHKKFRALRHREFE
TAEADASSSTSGSNSLSAGSPRQSPVPNSVATPPPSAASAAAGNPAQSQL
HMHLTRSSPKASMASSHSVLAKSLMAEPRMTPEQMKRSDIIQNYLKRENS
TAASSTTNGVGNRSPSSSSTPPPSAVQNQQRWGSSSVITTTCQQRQQSVS
PHSNGSSSSSSSSSSSSSSSSSTSSNCSSSSASSCQYFQSPHSTSNGTSA
PASSSSGSNSATPLLELQVDIADSAQPLNLSKKSPTPPPSKLHALVAAAN
AVQRYPTLSADVTVTASNGGPPSAAASPAPSSSPPASVGSPNPGLSAAVH
KVMLEAASFLDH
BO26551.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:45:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Eip75B-PD | 906 | CG8127-PD | 1..906 | 1..906 | 4607 | 100 | Plus |
| Eip75B-PG | 991 | CG8127-PG | 108..991 | 23..906 | 4489 | 100 | Plus |
| Eip75B-PF | 1412 | CG8127-PF | 529..1412 | 23..906 | 4489 | 100 | Plus |
| Eip75B-PE | 1412 | CG8127-PE | 529..1412 | 23..906 | 4489 | 100 | Plus |
| Eip75B-PA | 1355 | CG8127-PA | 472..1355 | 23..906 | 4489 | 100 | Plus |
