BO26553.complete Sequence
460 bp assembled on 2010-07-01
GenBank Submission: KX798013
> BO26553.complete
GAAGTTATCAGTCGACATGGCGGATCGGCTTACACAATTGCAAGACACCG
TTAATCAGCAAGCGGAGCACTTCTGCAATGCTATTGGTGTAATTCAACAA
ACGTCCCTTCCAAGTAAATTTGTTAATTTTGAACGCATTGGACCCCAAAC
GCCAATCCCATGTCCGCCGCAAGAAGACTATGCCCAATTATTTGCACAGT
TAATTGCACGATGTGCTAAAGACATCGACACCTTAATCGAGTCTCTTCCA
AATGAAGACAGCTCCATTGAACTCCAAAATTCTAGCCTTAAGAGGCTCGA
GATCGAAAACCAGGGAACTGCAAGAGACCTAGAGGAAGTAGTGCAAAAAG
GCGAACTTTTGCTAGAAAAAATGCAGTATTCTTTGGAATGCATTGCTCAG
GCTCAATTAGATATGCAAATAACACTCAAACATGATTTACAAGCAAGCTT
TCTAGACCAT
BO26553.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:57
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED21-RA | 429 | CG17397-PA | 1..426 | 17..442 | 2130 | 100 | Plus |
| MED21-RB | 429 | CG17397-PB | 1..426 | 17..442 | 2130 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED21-RA | 859 | CG17397-RA | 136..561 | 17..442 | 2130 | 100 | Plus |
| MED21-RB | 863 | CG17397-RB | 140..565 | 17..442 | 2130 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 25115222..25115608 | 442..56 | 1935 | 100 | Minus |
| 3L | 28110227 | 3L | 25115662..25115703 | 58..17 | 210 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:00:56 has no hits.
BO26553.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:22 Download gff for
BO26553.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED21-RB | 160..585 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:15 Download gff for
BO26553.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED21-RB | 140..565 | 17..444 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:37 Download gff for
BO26553.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| MED21-RB | 140..565 | 17..444 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:37 Download gff for
BO26553.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 25115218..25115605 | 59..444 | 99 | <- | Minus |
| 3L | 25115662..25115703 | 17..58 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:15 Download gff for
BO26553.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3LHet | 600674..601061 | 59..444 | 99 | <- | Minus |
| 3LHet | 601118..601159 | 17..58 | 100 | | Minus |
BO26553.pep Sequence
Translation from 16 to 460
> BO26553.pep
MADRLTQLQDTVNQQAEHFCNAIGVIQQTSLPSKFVNFERIGPQTPIPCP
PQEDYAQLFAQLIARCAKDIDTLIESLPNEDSSIELQNSSLKRLEIENQG
TARDLEEVVQKGELLLEKMQYSLECIAQAQLDMQITLKHDLQASFLDH
BO26553.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:32
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| MED21-PA | 142 | CG17397-PA | 1..142 | 1..142 | 721 | 100 | Plus |
| MED21-PB | 142 | CG17397-PB | 1..142 | 1..142 | 721 | 100 | Plus |
