Clone BO26555 Report

Search the DGRC for BO26555

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:265
Well:55
Vector:pDNR-Dual
Associated Gene/TranscriptCG32803-RA
Protein status:BO26555.pep: Imported from assembly
Sequenced Size:673

Clone Sequence Records

BO26555.complete Sequence

673 bp assembled on 2010-07-01

GenBank Submission: KX796666

> BO26555.complete
GAAGTTATCAGTCGACATGGCTCACTCGAACAAGGCTCGCAAAGCAGCCA
AAGAGGCAAACGCCAAGAAGTCTGCGGGATCGGGAACAGAGAGCAAACCG
GAGCACGTAAAGATACATGGCCCAGGCGATCGTAGTGCAGGAGTTCTGAC
TGGCGACCAGTTCCTGGAGAGCTTGCTCCAGACTCTCTACAGGTCATGGC
TTCAAATCTGCCGCCTGGCAGATTTTGTGATGTCCGAGCTAGGTGGAAAT
GATTTCCTGGAGGCCACCGCGGCCTGGTGCACCCGGAATCCGCACGTTGC
TATCTGCCTGCTAGCTGGTGGTCTTGTATTCATGCTGCCCTTCCTTATAA
TATTTGGGTTTGGAATAGCCACCATGGTTATGACCTTTACAGGTTTGCTG
GTGCTAGAAGGCACACTCCTGACCATTGTGTCCATGGTGTTCTTCGCCTG
CCTGGGAGGACTAGTCATAATGGTACCTCTCTTCGGTGTCGCCGCTGTTG
CTGCCTATTTCGGATTTGCCCAGGTGTATGGCCTATGTGATGGAATAGAG
ATCCATAAGAGCGCGTGGGTCATGTTCTTTAGGGATCAACGGAAGGCCGG
CGATCCGCCGCCAGCTGCTGTGACCATAACCGATGAACCCACTTCTACGA
CTGCAGCAAGCTTTCTAGACCAT

BO26555.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG32803-RA 642 CG32803-PA 1..639 17..655 3195 100 Plus
CG32803-RC 729 CG32803-PC 90..726 19..655 3185 100 Plus
CG32803-RD 624 CG32803-PD 1..621 17..655 2890 97.2 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG32803-RA 818 CG32803-RA 108..748 15..655 3205 100 Plus
CG32803-RC 905 CG32803-RC 199..835 19..655 3185 100 Plus
CG32803-RD 800 CG32803-RD 108..730 15..655 2900 97.2 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:50
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 1900769..1901015 655..409 1235 100 Minus
X 23542271 X 1901064..1901277 411..198 1070 100 Minus
X 23542271 X 1901436..1901615 198..19 900 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:00:51 has no hits.

BO26555.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:21 Download gff for BO26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG32803-RA 137..775 17..657 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:14 Download gff for BO26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG32803-RA 110..748 17..657 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:35 Download gff for BO26555.complete
Subject Subject Range Query Range Percent Splice Strand
CG32803-RA 110..748 17..657 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:35 Download gff for BO26555.complete
Subject Subject Range Query Range Percent Splice Strand
X 1900767..1901013 411..657 99 <- Minus
X 1901065..1901277 198..410 100 <- Minus
X 1901437..1901616 17..197 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:14 Download gff for BO26555.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 1795098..1795310 198..410 100 <- Minus
arm_X 1794800..1795046 411..657 99 <- Minus
arm_X 1795470..1795649 17..197 99   Minus

BO26555.pep Sequence

Translation from 16 to 673

> BO26555.pep
MAHSNKARKAAKEANAKKSAGSGTESKPEHVKIHGPGDRSAGVLTGDQFL
ESLLQTLYRSWLQICRLADFVMSELGGNDFLEATAAWCTRNPHVAICLLA
GGLVFMLPFLIIFGFGIATMVMTFTGLLVLEGTLLTIVSMVFFACLGGLV
IMVPLFGVAAVAAYFGFAQVYGLCDGIEIHKSAWVMFFRDQRKAGDPPPA
AVTITDEPTSTTAASFLDH

BO26555.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:31
Subject Length Description Subject Range Query Range Score Percent Strand
CG32803-PA 213 CG32803-PA 1..213 1..213 1103 100 Plus
CG32803-PC 242 CG32803-PC 31..242 2..213 1098 100 Plus
CG32803-PD 207 CG32803-PD 1..207 1..213 1059 97.2 Plus
CG32803-PB 142 CG32803-PB 1..142 72..213 738 100 Plus