BO26555.complete Sequence
673 bp assembled on 2010-07-01
GenBank Submission: KX796666
> BO26555.complete
GAAGTTATCAGTCGACATGGCTCACTCGAACAAGGCTCGCAAAGCAGCCA
AAGAGGCAAACGCCAAGAAGTCTGCGGGATCGGGAACAGAGAGCAAACCG
GAGCACGTAAAGATACATGGCCCAGGCGATCGTAGTGCAGGAGTTCTGAC
TGGCGACCAGTTCCTGGAGAGCTTGCTCCAGACTCTCTACAGGTCATGGC
TTCAAATCTGCCGCCTGGCAGATTTTGTGATGTCCGAGCTAGGTGGAAAT
GATTTCCTGGAGGCCACCGCGGCCTGGTGCACCCGGAATCCGCACGTTGC
TATCTGCCTGCTAGCTGGTGGTCTTGTATTCATGCTGCCCTTCCTTATAA
TATTTGGGTTTGGAATAGCCACCATGGTTATGACCTTTACAGGTTTGCTG
GTGCTAGAAGGCACACTCCTGACCATTGTGTCCATGGTGTTCTTCGCCTG
CCTGGGAGGACTAGTCATAATGGTACCTCTCTTCGGTGTCGCCGCTGTTG
CTGCCTATTTCGGATTTGCCCAGGTGTATGGCCTATGTGATGGAATAGAG
ATCCATAAGAGCGCGTGGGTCATGTTCTTTAGGGATCAACGGAAGGCCGG
CGATCCGCCGCCAGCTGCTGTGACCATAACCGATGAACCCACTTCTACGA
CTGCAGCAAGCTTTCTAGACCAT
BO26555.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:52
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32803-RA | 642 | CG32803-PA | 1..639 | 17..655 | 3195 | 100 | Plus |
CG32803-RC | 729 | CG32803-PC | 90..726 | 19..655 | 3185 | 100 | Plus |
CG32803-RD | 624 | CG32803-PD | 1..621 | 17..655 | 2890 | 97.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:54
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32803-RA | 818 | CG32803-RA | 108..748 | 15..655 | 3205 | 100 | Plus |
CG32803-RC | 905 | CG32803-RC | 199..835 | 19..655 | 3185 | 100 | Plus |
CG32803-RD | 800 | CG32803-RD | 108..730 | 15..655 | 2900 | 97.2 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
X | 23542271 | X | 1900769..1901015 | 655..409 | 1235 | 100 | Minus |
X | 23542271 | X | 1901064..1901277 | 411..198 | 1070 | 100 | Minus |
X | 23542271 | X | 1901436..1901615 | 198..19 | 900 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:00:51 has no hits.
BO26555.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:21 Download gff for
BO26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32803-RA | 137..775 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:14 Download gff for
BO26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32803-RA | 110..748 | 17..657 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:35 Download gff for
BO26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG32803-RA | 110..748 | 17..657 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:35 Download gff for
BO26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
X | 1900767..1901013 | 411..657 | 99 | <- | Minus |
X | 1901065..1901277 | 198..410 | 100 | <- | Minus |
X | 1901437..1901616 | 17..197 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:14 Download gff for
BO26555.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_X | 1795098..1795310 | 198..410 | 100 | <- | Minus |
arm_X | 1794800..1795046 | 411..657 | 99 | <- | Minus |
arm_X | 1795470..1795649 | 17..197 | 99 | | Minus |
BO26555.pep Sequence
Translation from 16 to 673
> BO26555.pep
MAHSNKARKAAKEANAKKSAGSGTESKPEHVKIHGPGDRSAGVLTGDQFL
ESLLQTLYRSWLQICRLADFVMSELGGNDFLEATAAWCTRNPHVAICLLA
GGLVFMLPFLIIFGFGIATMVMTFTGLLVLEGTLLTIVSMVFFACLGGLV
IMVPLFGVAAVAAYFGFAQVYGLCDGIEIHKSAWVMFFRDQRKAGDPPPA
AVTITDEPTSTTAASFLDH
BO26555.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG32803-PA | 213 | CG32803-PA | 1..213 | 1..213 | 1103 | 100 | Plus |
CG32803-PC | 242 | CG32803-PC | 31..242 | 2..213 | 1098 | 100 | Plus |
CG32803-PD | 207 | CG32803-PD | 1..207 | 1..213 | 1059 | 97.2 | Plus |
CG32803-PB | 142 | CG32803-PB | 1..142 | 72..213 | 738 | 100 | Plus |