BO26566.complete Sequence
2011 bp assembled on 2010-07-15
GenBank Submission: KX797442
> BO26566.complete
GAAGTTATCAGTCGACATGACAATCAAGCCAGTGAGCGCCCCACCGAGCG
CGAAACGCGTGGCTGGAAATGTGGATCCCGATAACAAGGAGGCGCAGGTG
GTTGTGGTGGAGCAGTCGGTGGTCAGCCAGACCCATAACCATGCCCACAA
CCACCGTAACGTCGTCATCGATGGGCAGAGCCCCCAAAGGCGTGGCGAGG
TCTACGACGAACTGGCACGCACCCATCGCTGCAGCCCACACAAGAGCACA
CGCTCGAAGCGTCGCGAACACCACGAAGCGCATGCACACCTTTATAAGCG
CGATCGTCTGGAGCGCGAGAAACTAGTCCATCCGACGGCAGCGGCGGGCA
GTGGAGCACCTGGTGTATCTGGCAGCAAGTGCAACAGTCCACCGTCGACC
TCAACTTCCGGCAGTAGCAGTCCGTCGGCAGTGGGCCGAAACTCACCCGA
ACACTTGGGACTGGGCTGCACCACGGTGCCCACAGCTCAGGTCCAGATGT
CTACGTCTACGGCGGCCGCCAATTTGCTAAAAACAGTGGAGGAAACCTTT
TCCGGTTACAATAGCGGCGATGAGCATCATCAGCCCAAAGAGCGATTGAT
TCCAGTGGAAGAGTGGCAGCGACGTGATCTGGAGTTCGCCAAATGTATGG
AACAGCGCGGCTACGAACTTAAGCCTGTCGAGGAGGATGGCGCCTGCCTG
TTTCGCTCTATATCCCTTCAAATATACGGCGACGAGGAGATGCACGACGT
GATCCGCCAACACACTATGGATTATATACACGAGAATCGGGAATATTTCG
GTCAGTTTGTCACCGAGGACATCAACAGCTATATACAGCGTAAACGGGCT
CGTGATGCTCATGGCAACCACATTGAGATCCAAGCTATTTCCGAGATCTA
CAGCCGTACCGTCGAGGTATACTGCTACCAGTCAAATCCCATCAATATAT
TTAACTCGGAACAGTCGCAGGCGGGTTATCCCCCGCTGCGTTTATCCTAT
CAGCGCGGATCACACTACAATGCTATTCTGGATCCCTACAACGCCACCGT
TGGCGTGGGCCTGGGCTTGGCTGGATACAAGCCCGAGATCCAAACCAAAG
AGGCTGTGCGTCTCAGCGAGCAGTTGGAGATCGAACAGACCATGTTTGAA
GATAAACTAAAGACAACAGACTGGGAGGCCACTAACGAAGCCATTGAGGA
GCAAATTGCTCGCGAGTCTTACCTACAGTGGTGTCGCGAGAATACGCAAC
GCTCGCGCAACAGCAATACAGCGGCAGGATCGGCCACATCCTCGACGGTT
ACCTCTGCAGAAGCGCTTACCGACTCCGATGCCTCGCCCTCAAAATACTC
TGCGTGTGGGGGCACTGGCAGCAGCGGTAATCCACCTGTGGCTTTGACCA
GCGGTAGTGGTGGTGATGGCGCCGGACCCGCATTTTCGCTGTCGCCCAAA
ACACTTAACCAGTTTAGTCACAAGCTACCGCAAGAGGTTAACGAGCTGGG
TGGCTACGATAGCGATGCAACAGACATGAGTAGCACCAGCTCGGTGGGAC
ACAGCGGTGGCAGTTCATCGCCGAGCACAGCTGCAAGCCAACGTTCGGGC
AAGGGATCCAAGTCTCAACGTCGCGCTACGGCCCTCAGAAAGAAGCGACG
ACACGAAACTCGCGAGACGACTTTGGCTAGCAAGAGCGCCGAGGCTTTAG
AGGCTCCGCTGAGGAAGAGTCCAAAGCGCGATTCAGCGCCATCAGTGGCA
CGAGCTGACACGCCAGAGGCTGAGCAGCGTCCCTCCACCTCGAAGCAGTC
GTCTCATTCGCCACAGAAGAACGTGGATAGCAAGTCACCTACGGAGCAGA
GTTACTCTAGCTTTTATCAGGAGCTGCTCGAGGCATCCTACGCCAATGAA
GGCGCTAACGAAAGCGAGATGCTGCAGCAAGCCATCCAGATGTCCACACG
CGATTACATGGAGGACCAAAAACGAAAGTTTCTCTTCGGACCGGCAAGCT
TTCTAGACCAT
BO26566.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 04:49:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6091-RF | 1980 | CG6091-PF | 1..1977 | 17..1993 | 9885 | 100 | Plus |
CG6091-RE | 1980 | CG6091-PE | 1..1977 | 17..1993 | 9885 | 100 | Plus |
CG6091-RG | 1707 | CG6091-PG | 1..1670 | 17..1686 | 8350 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 04:49:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6091-RF | 3179 | CG6091-RF | 530..2508 | 15..1993 | 9895 | 100 | Plus |
CG6091-RE | 3276 | CG6091-RE | 627..2605 | 15..1993 | 9895 | 100 | Plus |
CG6091-RD | 2167 | CG6091-RD | 101..1849 | 245..1993 | 8745 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 04:49:39
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 11606536..11607085 | 1686..1137 | 2750 | 100 | Minus |
3L | 28110227 | 3L | 11607652..11608185 | 778..245 | 2670 | 100 | Minus |
3L | 28110227 | 3L | 11606256..11606473 | 1902..1685 | 1090 | 100 | Minus |
3L | 28110227 | 3L | 11607144..11607346 | 1138..936 | 1015 | 100 | Minus |
3L | 28110227 | 3L | 11608676..11608839 | 178..15 | 820 | 100 | Minus |
3L | 28110227 | 3L | 11607435..11607591 | 935..779 | 785 | 100 | Minus |
3L | 28110227 | 3L | 11606107..11606200 | 1993..1900 | 470 | 100 | Minus |
3L | 28110227 | 3L | 11608537..11608606 | 246..177 | 350 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 04:49:40 has no hits.
BO26566.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-15 09:53:23 Download gff for
BO26566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6091-RF | 507..2483 | 17..1995 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:04:40 Download gff for
BO26566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6091-RE | 629..2605 | 17..1995 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 05:38:06 Download gff for
BO26566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG6091-RE | 629..2605 | 17..1995 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 05:38:06 Download gff for
BO26566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 11607435..11607591 | 779..935 | 100 | <- | Minus |
3L | 11606105..11606198 | 1902..1995 | 97 | <- | Minus |
3L | 11606257..11606471 | 1687..1901 | 100 | <- | Minus |
3L | 11606536..11607083 | 1139..1686 | 100 | <- | Minus |
3L | 11607144..11607346 | 936..1138 | 100 | <- | Minus |
3L | 11607652..11608183 | 247..778 | 100 | <- | Minus |
3L | 11608537..11608604 | 179..246 | 100 | <- | Minus |
3L | 11608676..11608837 | 17..178 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:04:40 Download gff for
BO26566.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 11600244..11600446 | 936..1138 | 100 | <- | Minus |
arm_3L | 11600535..11600691 | 779..935 | 100 | <- | Minus |
arm_3L | 11599205..11599298 | 1902..1995 | 97 | <- | Minus |
arm_3L | 11599357..11599571 | 1687..1901 | 100 | <- | Minus |
arm_3L | 11599636..11600183 | 1139..1686 | 100 | <- | Minus |
arm_3L | 11600752..11601283 | 247..778 | 100 | <- | Minus |
arm_3L | 11601637..11601704 | 179..246 | 100 | <- | Minus |
arm_3L | 11601776..11601937 | 17..178 | 100 | | Minus |
BO26566.pep Sequence
Translation from 16 to 2011
> BO26566.pep
MTIKPVSAPPSAKRVAGNVDPDNKEAQVVVVEQSVVSQTHNHAHNHRNVV
IDGQSPQRRGEVYDELARTHRCSPHKSTRSKRREHHEAHAHLYKRDRLER
EKLVHPTAAAGSGAPGVSGSKCNSPPSTSTSGSSSPSAVGRNSPEHLGLG
CTTVPTAQVQMSTSTAAANLLKTVEETFSGYNSGDEHHQPKERLIPVEEW
QRRDLEFAKCMEQRGYELKPVEEDGACLFRSISLQIYGDEEMHDVIRQHT
MDYIHENREYFGQFVTEDINSYIQRKRARDAHGNHIEIQAISEIYSRTVE
VYCYQSNPINIFNSEQSQAGYPPLRLSYQRGSHYNAILDPYNATVGVGLG
LAGYKPEIQTKEAVRLSEQLEIEQTMFEDKLKTTDWEATNEAIEEQIARE
SYLQWCRENTQRSRNSNTAAGSATSSTVTSAEALTDSDASPSKYSACGGT
GSSGNPPVALTSGSGGDGAGPAFSLSPKTLNQFSHKLPQEVNELGGYDSD
ATDMSSTSSVGHSGGSSSPSTAASQRSGKGSKSQRRATALRKKRRHETRE
TTLASKSAEALEAPLRKSPKRDSAPSVARADTPEAEQRPSTSKQSSHSPQ
KNVDSKSPTEQSYSSFYQELLEASYANEGANESEMLQQAIQMSTRDYMED
QKRKFLFGPASFLDH
BO26566.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:28:51
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG6091-PF | 659 | CG6091-PF | 1..659 | 1..659 | 3412 | 100 | Plus |
CG6091-PE | 659 | CG6091-PE | 1..659 | 1..659 | 3412 | 100 | Plus |
CG6091-PG | 568 | CG6091-PG | 1..556 | 1..556 | 2894 | 100 | Plus |
CG6091-PD | 499 | CG6091-PD | 1..499 | 161..659 | 2570 | 100 | Plus |