BO26567.complete Sequence
3760 bp assembled on 2012-04-24
GenBank Submission: KX795011
> BO26567.complete
GAAGTTATCAGTCGACATGTCCCCCGGCGCCCATTTGCAGATGTCCCCGC
AGAACACTTCGTCCCTAAGTCAACACCATCCACATCAACAGCAACAGTTA
CAACCCCCACAGCAGCAACAACAGCATTTCCCTAACCATCACAGCGCCCA
GCAACAGTCGCAGCAGCAGCAGCAACAGGAGCAACAGAATCCCCAGCAGC
AGGCGCAACAGCAGCAGCAGATACTCCCACATCAACATTTGCAGCACCTG
CACAAGCATCCGCATCAGCTGCAACTGCATCAGCAGCAGCAACAACAACT
CCACCAGCAACAGCAGCAACACTTCCACCAGCAGTCGCTGCAAGGGCTGC
ATCAGGGTAGCAGCAATCCGGATTCGAATATGAGCACTGGCTCCTCGCAT
AGCGAGAAGGATGTCAATGATATGCTGAGTGGCGGTGCAGCAACGCCAGG
AGCTGCAGCAGCAGCGATTCAACAGCAACATCCCGCCTTTGCGCCCACAC
TGGGAATGCAGCAACCACCGCCGCCCCCACCTCAACACTCCAATAATGGA
GGCGAGATGGGCTACTTGTCAGCAGGCACGACCACGACGACGTCGGTGTT
AACGGTAGGCAAGCCTCGGACGCCAGCGGAGCGGAAACGGAAGCGAAAAA
TGCCTCCATGTGCCACTAGTGCGGATGAGGCGGGGAGTGGCGGTGGCTCT
GGCGGAGCAGGAGCAACCGTTGTTAACAACAGCAGCCTGAAGGGCAAATC
ATTGGCCTTTCGTGATATGCCCAAGGTAAACATGAGCCTGAATCTGGGCG
ATCGTCTGGGAGGATCTGCAGGAAGCGGAGTAGGAGCCGGTGGCGCCGGA
AGCGGGGGAGGTGGCGCTGGTTCCGGTTCTGGAAGCGGTGGCGGCAAAAG
CGCCCGCCTGATGCTGCCAGTCAGCGACAACAAGAAGATCAACGACTATT
TCAATAAGCAGCAAACGGGCGTGGGCGTCGGTGTGCCAGGTGGTGCGGGA
GGCAATACCGCTGGCCTTCGAGGATCACATACGGGAGGTGGCAGCAAGTC
ACCCTCATCCGCCCAGCAGCAGCAAACGGCGGCACAGCAGCAGGGAAGCG
GTGTTGCGACGGGAGGCAGTGCAGGCGGTTCCGCTGGCAACCAGGTGCAA
GTGCAAACGAGCAGCGCTTACGCCCTTTACCCACCAGCTAGTCCCCAAAC
CCAGACGTCACAGCAACAGCAGCAGCAGCAACCGGGATCAGACTTTCACT
ATGTCAACTCCAGCAAGGCGCAGCAACAACAGCAGCGTCAACAGCAACAG
ACTTCCAATCAAATGGTTCCTCCACACGTGGTCGTTGGCCTTGGTGGTCA
TCCACTGAGCCTCGCGTCCATTCAGCAGCAGACGCCCTTATCCCAGCAGC
AACAGCAGCAACAACAGCAGCAGCAACAGCAGCAACTGGGACCACCGACC
ACATCGACGGCCTCCGTCGTGCCAACGCATCCGCATCAACTCGGATCCCT
GGGAGTTGTTGGGATGGTCGGTGTGGGTGTTGGCGTGGGCGTTGGAGTAA
ATGTGGGTGTGGGACCACCACTGCCACCACCACCGCCGATGGCCATGCCA
GCGGCCATTATCACTTATAGTAAGGCCACTCAAACGGAGGTGTCGCTGCA
TGAATTGCAGGAGCGCGAAGCGGAGCACGAATCGGGCAAGGTGAAGCTAG
ACGAGATGACACGGCTGTCCGATGAACAAAAGTCCCAAATTGTTGGCAAC
CAGAAGACGATTGACCAGCACAAGTGCCACATAGCCAAGTGTATTGATGT
GGTCAAGAAGCTGTTGAAGGAGAAGAGCAGCATCGAGAAGAAGGAGGCGC
GACAGAAGTGCATGCAGAATCGCCTCAGGCTCGGACAGTTTGTTACCCAA
CGAGTGGGCGCCACATTCCAGGAGAACTGGACGGACGGCTATGCGTTCCA
GGAGCTGAGTCGGCGGCAAGAAGAAATAACCGCTGAGCGTGAAGAGATAG
ATCGGCAGAAAAAGCAGCTGATGAAAAAGCGTCCGGCGGAGTCCGGACGC
AAGCGCAACAACAACAGTAACCAGAACAACCAGCAGCAGCAGCAACAGCA
ACACCAGCAACAGCAGCAGCAACAAAATTCCAACTCGAACGATTCCACGC
AGCTGACGAGCGGAGTTGTTACCGGTCCAGGCAGTGATCGTGTGAGCGTA
AGCGTCGACAGCGGATTGGGTGGCAATAATGCGGGCGCGATCGGTGGCGG
AACCGTTGGTGGTGGCGTTGGAGGTGGTGGTGTTGGAGGCGGTGGTGTCG
GAGGCGGCGGTGGACGTGGACTTTCTCGCAGCAATTCGACGCAGGCCAAT
CAGGCTCAATTGCTGCACAACGGCGGTGGTGGTTCGGGCGGCAATGTCGG
CAACTCGGGCGGCGTTGGCGACCGCTTGTCAGATCGAGGAGGAGGAGGTG
GCGGCATCGGCGGAAACGATAGCGGCAGCTGCTCGGACTCGGGCACTTTC
CTGAAGCCAGACCCCGTATCGGGTGCCTACACAGCGCAGGAGTATTACGA
GTACGATGAGATCCTCAAGTTGCGACAAAATGCCCTCAAAAAGGAGGACG
CCGACCTGCAGCTGGAGATGGAGAAGCTGGAGCGGGAGCGCAATCTGCAC
ATCCGAGAGCTCAAGCGGATTCTTAACGAGGATCAGTCCCGCTTTAACAA
TCATCCCGTGCTGAATGATCGCTATCTTCTGTTGATGCTCCTGGGCAAGG
GCGGCTTCTCAGAGGTCCACAAGGCCTTCGACCTGAAGGAGCAACGCTAT
GTCGCATGTAAGGTGCACCAATTAAACAAGGATTGGAAGGAGGATAAGAA
AGCTAATTATATCAAACACGCTTTGCGGGAATACAACATTCACAAGGCAC
TGGATCATCCGCGGGTCGTCAAGCTATACGATGTCTTCGAGATCGATGCG
AATTCCTTTTGCACAGTGCTCGAATACTGTGATGGCCACGATCTGGACTT
CTATTTGAAGCAACATAAGACTATACCCGAGCGTGAAGCGCGCTCGATAA
TAATGCAGGTTGTATCTGCACTCAAGTATCTAAATGAGATTAAGCCTCCA
GTTATCCACTACGATCTGAAGCCCGGCAACATTCTGCTTACCGAGGGCAA
CGTCTGCGGCGAGATTAAGATCACCGACTTCGGTCTGTCAAAGGTGATGG
ACGACGAGAATTACAATCCCGATCACGGCATGGATCTGACCTCTCAGGGG
GCGGGAACCTACTGGTATCTGCCACCCGAGTGCTTTGTCGTGGGCAAAAA
TCCGCCGAAAATCTCCTCCAAAGTGGACGTATGGAGTGTGGGTGTTATCT
TCTACCAGTGTCTGTACGGCAAAAAGCCCTTCGGTCACAATCAGTCGCAG
GCCACGATTCTCGAGGAGAATACGATCCTGAAGGCCACCGAAGTGCAGTT
CTCCAACAAGCCAACCGTTTCTAACGAGGCCAAGAGTTTCATTCGGGGAT
GCTTGGCCTATCGCAAGGAGGATCGCATGGATGTGTTCGCACTGGCCAGG
CACGAGTACATTCAGCCACCGATACCGAAACATGGGCGCGGTTCGCTCAA
TCAGCAACAGCAGGCGCAACAACAGCAGCAGCAACAACAGCAACAGCAGC
AGCAACAGTCGTCGACGTCACAGGCCAATTCTACAGGCCAGACATCTTTC
TCTGCCCACATGTTTGGCAATATGAATCAGTCGAGTTCGTCCGCAAGCTT
TCTAGACCAT
BO26567.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 07:39:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-RG | 4470 | CG34412-PG | 741..4467 | 16..3742 | 18620 | 100 | Plus |
| tlk-RN | 3729 | CG34412-PN | 1..3726 | 17..3742 | 18615 | 100 | Plus |
| tlk-RC | 3765 | CG34412-PC | 37..3762 | 17..3742 | 18615 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 07:39:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-RM | 7490 | CG34412-RM | 394..4121 | 15..3742 | 18625 | 100 | Plus |
| tlk-RG | 7243 | CG34412-RG | 1941..5667 | 16..3742 | 18620 | 100 | Plus |
| tlk-RN | 4355 | CG34412-RN | 395..4120 | 17..3742 | 18615 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 07:39:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 3781655..3783560 | 17..1922 | 9515 | 99.9 | Plus |
| X | 23542271 | X | 3783674..3784441 | 1919..2686 | 3840 | 100 | Plus |
| X | 23542271 | X | 3786142..3786401 | 3483..3742 | 1300 | 100 | Plus |
| X | 23542271 | X | 3785593..3785813 | 3264..3484 | 1105 | 100 | Plus |
| X | 23542271 | X | 3785287..3785497 | 3056..3266 | 1055 | 100 | Plus |
| X | 23542271 | X | 3785028..3785226 | 2862..3060 | 980 | 99.5 | Plus |
| X | 23542271 | X | 3784524..3784706 | 2683..2865 | 915 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 07:39:18
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2316..2545 | 71..300 | 465 | 68 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2576..2988 | 66..482 | 390 | 58.8 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6722..6951 | 71..297 | 387 | 66.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6758..7016 | 71..332 | 375 | 63 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2364..2781 | 71..482 | 367 | 59.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6791..7200 | 71..480 | 306 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2547..2857 | 1172..1491 | 290 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6731..6967 | 1255..1495 | 230 | 60.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6735..7028 | 1140..1436 | 226 | 59.1 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6869..7112 | 71..320 | 218 | 59.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6725..6817 | 1211..1300 | 205 | 72 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2306..2532 | 1213..1455 | 202 | 59.3 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2339..2549 | 1210..1422 | 194 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6932 | 1216..1442 | 187 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2319..2538 | 1211..1436 | 178 | 57 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2403..2664 | 1211..1458 | 176 | 56.5 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6775..7041 | 1210..1475 | 168 | 59 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2787..2999 | 1211..1429 | 161 | 58.5 | Plus |
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 7127..7396 | 1192..1457 | 154 | 54.9 | Plus |
| TART-C | 11124 | TART-C TARTC 11124bp | 8561..8831 | 1174..1440 | 150 | 54.7 | Plus |
| roo | 9092 | roo DM_ROO 9092bp | 1061..1146 | 1211..1299 | 149 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6749..6828 | 1211..1299 | 144 | 69.7 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2454..2496 | 1394..1436 | 143 | 81.4 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 1502..1546 | 1255..1299 | 135 | 77.8 | Plus |
BO26567.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-06 12:07:15 Download gff for
BO26567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RG | 1303..5028 | 17..3744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.32.fasta performed 2012-04-24 17:01:41 Download gff for
BO26567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RG | 1942..5667 | 17..3744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:55 Download gff for
BO26567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RM | 396..4121 | 17..3744 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:01:04 Download gff for
BO26567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| tlk-RM | 396..4121 | 17..3744 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:01:04 Download gff for
BO26567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 3781655..3783559 | 17..1921 | 99 | -> | Plus |
| X | 3783677..3784441 | 1922..2686 | 100 | -> | Plus |
| X | 3784528..3784706 | 2687..2865 | 100 | -> | Plus |
| X | 3785032..3785224 | 2866..3058 | 100 | -> | Plus |
| X | 3785290..3785495 | 3059..3264 | 100 | -> | Plus |
| X | 3785594..3785813 | 3265..3484 | 100 | -> | Plus |
| X | 3786144..3786401 | 3485..3744 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:55 Download gff for
BO26567.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 3679323..3679528 | 3059..3264 | 100 | -> | Plus |
| arm_X | 3675688..3677592 | 17..1921 | 99 | -> | Plus |
| arm_X | 3677710..3678474 | 1922..2686 | 100 | -> | Plus |
| arm_X | 3678561..3678739 | 2687..2865 | 100 | -> | Plus |
| arm_X | 3679065..3679257 | 2866..3058 | 100 | -> | Plus |
| arm_X | 3679627..3679846 | 3265..3484 | 100 | -> | Plus |
| arm_X | 3680177..3680434 | 3485..3744 | 99 | | Plus |
BO26567.pep Sequence
Translation from 16 to 3760
> BO26567.pep
MSPGAHLQMSPQNTSSLSQHHPHQQQQLQPPQQQQQHFPNHHSAQQQSQQ
QQQQEQQNPQQQAQQQQQILPHQHLQHLHKHPHQLQLHQQQQQQLHQQQQ
QHFHQQSLQGLHQGSSNPDSNMSTGSSHSEKDVNDMLSGGAATPGAAAAA
IQQQHPAFAPTLGMQQPPPPPPQHSNNGGEMGYLSAGTTTTTSVLTVGKP
RTPAERKRKRKMPPCATSADEAGSGGGSGGAGATVVNNSSLKGKSLAFRD
MPKVNMSLNLGDRLGGSAGSGVGAGGAGSGGGGAGSGSGSGGGKSARLML
PVSDNKKINDYFNKQQTGVGVGVPGGAGGNTAGLRGSHTGGGSKSPSSAQ
QQQTAAQQQGSGVATGGSAGGSAGNQVQVQTSSAYALYPPASPQTQTSQQ
QQQQQPGSDFHYVNSSKAQQQQQRQQQQTSNQMVPPHVVVGLGGHPLSLA
SIQQQTPLSQQQQQQQQQQQQQQLGPPTTSTASVVPTHPHQLGSLGVVGM
VGVGVGVGVGVNVGVGPPLPPPPPMAMPAAIITYSKATQTEVSLHELQER
EAEHESGKVKLDEMTRLSDEQKSQIVGNQKTIDQHKCHIAKCIDVVKKLL
KEKSSIEKKEARQKCMQNRLRLGQFVTQRVGATFQENWTDGYAFQELSRR
QEEITAEREEIDRQKKQLMKKRPAESGRKRNNNSNQNNQQQQQQQHQQQQ
QQQNSNSNDSTQLTSGVVTGPGSDRVSVSVDSGLGGNNAGAIGGGTVGGG
VGGGGVGGGGVGGGGGRGLSRSNSTQANQAQLLHNGGGGSGGNVGNSGGV
GDRLSDRGGGGGGIGGNDSGSCSDSGTFLKPDPVSGAYTAQEYYEYDEIL
KLRQNALKKEDADLQLEMEKLERERNLHIRELKRILNEDQSRFNNHPVLN
DRYLLLMLLGKGGFSEVHKAFDLKEQRYVACKVHQLNKDWKEDKKANYIK
HALREYNIHKALDHPRVVKLYDVFEIDANSFCTVLEYCDGHDLDFYLKQH
KTIPEREARSIIMQVVSALKYLNEIKPPVIHYDLKPGNILLTEGNVCGEI
KITDFGLSKVMDDENYNPDHGMDLTSQGAGTYWYLPPECFVVGKNPPKIS
SKVDVWSVGVIFYQCLYGKKPFGHNQSQATILEENTILKATEVQFSNKPT
VSNEAKSFIRGCLAYRKEDRMDVFALARHEYIQPPIPKHGRGSLNQQQQA
QQQQQQQQQQQQQQSSTSQANSTGQTSFSAHMFGNMNQSSSSASFLDH
BO26567.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 08:09:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| tlk-PN | 1242 | CG34412-PN | 1..1242 | 1..1242 | 6517 | 100 | Plus |
| tlk-PC | 1254 | CG32782-PC | 13..1254 | 1..1242 | 6517 | 100 | Plus |
| tlk-PJ | 1266 | CG34412-PJ | 25..1266 | 1..1242 | 6517 | 100 | Plus |
| tlk-PI | 1242 | CG34412-PI | 1..1242 | 1..1242 | 6517 | 100 | Plus |
| tlk-PH | 1266 | CG34412-PH | 25..1266 | 1..1242 | 6517 | 100 | Plus |
