BO26580.complete Sequence
1990 bp assembled on 2010-08-02
GenBank Submission: KX797571
> BO26580.complete
GAAGTTATCAGTCGACATGGTGCAAAATCTGTGGACTGCCCTCCTTCTGC
TGGGCAGTGCCACCTGCGGTTCGAGTGTGCCGGTCAAGGCAAATGATCCG
GAACAGAGTTGTCCGTACCTCGGAGAGTGCAATTCCACGATCAATCAGCA
GCACATCGATACGCTGATGTCCTACGTGGACAGCGAAAAAAATCCCTGCG
AGGATTTCTATGCCTACGCCTGCGGAAAATGGCGGGCGAAGCATGGAAGC
CACACAACCGCCACGATGATCAGCGAATCGCAAATTAACCGCCAGTACGA
GGATTTGTTCCTACAACTGCTGAGGAATCCCAGCGCCCCGGAATATGGAT
ACCCCATGTTCGCCAAGGTGTTGGCCCATTACCAGTCATGCATCGCGCTG
GAGAAGCCGGATCTGAGGCGATACATCGAGCTACTGGACCGGGATCTGCT
CGCCTCCTTAAACTCCACACACTGGATGCACCTGCTGGCAGCTCTGGGGC
GCTACGGCTACCACGGTCACTACGTCCAAGTAGAGGTACGTTGGTACAAC
GCCACCCATCACATGATCTTCCTGCTGCCGCACAATCGCCACCTAAACCT
GAGTCTCACGCAAGACATCTATGATGCGCTGAGTCAGGATGGCTCCTCCT
GGCCACCGCTCCACCAGCTACAGGAGCAGTTCAGAAGTTTGGAGCAGAAC
TTGGTGCGACTGGCTAAGCCCCATTCGGCGGACGATACCTTCCGGAATTA
CAGTCTGGATCAGATTCGGACGGAGGTGCCGGGTCTGCATTGGGACGAGG
CGCTGAGGACACAGCTGGGCAGATCGGTGCCGGGGAATCATGTCTTCCAG
GTGGACGACTTGGACGCGATCGAGGGGCTTGTGGAGTACCTCAATACGGT
AGATACTCTGCTGCTCAATCGGTACAGCCTGGCAAGATTTCTCAGCCACC
TGCTTGAGCTGCCACATAACCCGCTGGCCACTTGGGAGTCCGGACAGCGG
TCGCGGGGAAGGAACTGTATTCGTCACATGCGCCGCTCTGTTTACCTGCC
GATGAACTACGTCTACGAGAGAAGTTTCTACTCCCGGCGCCGCCACGCGG
ATGAGCTGGTCATCCACAGCGTCTTCCAGCAGCTGCAGAGTCAGCTGGAG
CTGCGGGTCCAGCACAACGCCTTCAATCTAAGTCAGGATCTGGTGAAATC
GCTGCAGGCAAAGGTGCACCAGATGCGCATCAATGTGGGCAACCTACCGC
CCAATGTGACGGAGCAATTCTATTGGGACAGCGACCGGCGGTGGAGCGTG
GGCAGGGACTTCTACGAGAATCACCTGAACAGCCTGCTCTACTACTACAC
GCTCGTCGCCGATTTGGAAAGCAGCTCGGACCAGGAGGAGCGGGACATCT
GGTACAGCTTCAATATGCATACGCCCGAGTTTCCCGACAACATCGATGCC
ACGCCGTACTTCTACTGCCTGGGCAACATCATCTTCGTGCCGTACTCCTA
CGTAAAGCGTCCCTTCTTCGATGCCAACTTCTGGCCAGCGCTGCTCTACG
GTGATCTGGCCAACACCCTGGGCCACGAGATCATGCACGCCTTCGACACC
GATCTGGTGGACTACGATGCGCAGGGTAATCTGCGTAACTTTAGCGACCA
GTTGGGCGAAGTGGAGCTCTACAACGGAGCGGTTGGATGCCTGAACAGCA
GCGCTGTTATGCTAAACGAGCGCACCTCCGACGTCAGCGGATCCCGGCTG
GCCATGCAAACCTACGGTGGCGACTGGCTCACTCGGTCGGGCAACGGGCG
TCTGTACTTCCTCCAGTTCGCCCACTTCTTCTGCGGCGACGAGGGCGACC
AGTACCATGACTCCGGCAGCCAGCGGCTGAACTACGCCCTCGGCCAGGTG
CCGCAGTTCGCAGAGGTGTTCCGGTGCCATGTTGGCTCCGGAATGACCAG
CGCGGACCAGTGTCCCTTCTGGGCAAGCTTTCTAGACCAT
BO26580.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:40:58
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9505-RA | 1959 | CG9505-PA | 1..1956 | 17..1972 | 9780 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:40:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9505-RA | 2309 | CG9505-RA | 260..2215 | 17..1972 | 9780 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:40:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 6368141..6370096 | 17..1972 | 9780 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:40:57 has no hits.
BO26580.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-02 10:19:46 Download gff for
BO26580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9505-RA | 258..2213 | 17..1974 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:25:48 Download gff for
BO26580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9505-RA | 260..2215 | 17..1974 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:22:53 Download gff for
BO26580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9505-RA | 260..2215 | 17..1974 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:22:53 Download gff for
BO26580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 6368141..6370096 | 17..1974 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:25:48 Download gff for
BO26580.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 6368141..6370096 | 17..1974 | 99 | | Plus |
BO26580.pep Sequence
Translation from 16 to 1990
> BO26580.pep
MVQNLWTALLLLGSATCGSSVPVKANDPEQSCPYLGECNSTINQQHIDTL
MSYVDSEKNPCEDFYAYACGKWRAKHGSHTTATMISESQINRQYEDLFLQ
LLRNPSAPEYGYPMFAKVLAHYQSCIALEKPDLRRYIELLDRDLLASLNS
THWMHLLAALGRYGYHGHYVQVEVRWYNATHHMIFLLPHNRHLNLSLTQD
IYDALSQDGSSWPPLHQLQEQFRSLEQNLVRLAKPHSADDTFRNYSLDQI
RTEVPGLHWDEALRTQLGRSVPGNHVFQVDDLDAIEGLVEYLNTVDTLLL
NRYSLARFLSHLLELPHNPLATWESGQRSRGRNCIRHMRRSVYLPMNYVY
ERSFYSRRRHADELVIHSVFQQLQSQLELRVQHNAFNLSQDLVKSLQAKV
HQMRINVGNLPPNVTEQFYWDSDRRWSVGRDFYENHLNSLLYYYTLVADL
ESSSDQEERDIWYSFNMHTPEFPDNIDATPYFYCLGNIIFVPYSYVKRPF
FDANFWPALLYGDLANTLGHEIMHAFDTDLVDYDAQGNLRNFSDQLGEVE
LYNGAVGCLNSSAVMLNERTSDVSGSRLAMQTYGGDWLTRSGNGRLYFLQ
FAHFFCGDEGDQYHDSGSQRLNYALGQVPQFAEVFRCHVGSGMTSADQCP
FWASFLDH
BO26580.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 05:45:16
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9505-PA | 652 | CG9505-PA | 1..652 | 1..652 | 3526 | 100 | Plus |
| CG42370-PA | 655 | CG9508-PA | 26..655 | 43..652 | 410 | 25 | Plus |
| CG9507-PA | 684 | CG9507-PA | 31..684 | 41..652 | 371 | 22 | Plus |
| CG4580-PA | 619 | CG4580-PA | 17..608 | 43..638 | 324 | 23.9 | Plus |
| CG8550-PA | 633 | CG8550-PA | 24..619 | 42..652 | 284 | 22.5 | Plus |
