BO26583.complete Sequence
655 bp assembled on 2010-07-01
GenBank Submission: KX799865
> BO26583.complete
GAAGTTATCAGTCGACATGACCACGCGTGGAATTCGGTGCAAGAAGTCCA
CATTGACGGAGTTGAAAATCGCCGTGATCGGAGCGCCCAGTGTTGGCAAA
AGCGCCCTAATTGTGCGTTTCTTGACAAAGCGTTACATCGGGGAGTACGA
TCATCAGACTGAGAATCGCTACAAGCACGAGGCTATGGTGGATGGCGAAC
CGGTGCTCTTTGAAATACTAGACACATGTCCCAAGGCTGAAGACGAATAC
CCCAATGCAGCTGAGCTCGTTCAGTGGGCCGATGGCCTATTGCTGGTCTA
CTCGATAACAGATCGCAAGAGTTTCAACTATATACGCCGTGCCAAATCCG
ATCTTCAGTCCGATACACCCGTCCAACTTTGTGCCAACAAAGTGGATATG
GTGCACCTGCGCCAGGTGAGCCGCGACGAGGGCGAAATCCTGGCCAAGGA
CTTTGAGTGCAAGTTCAGCGAGGTCTCCGCCGCCGACCACGTCGACCAGG
TGGCCGAGGTTTTCAACGAGCTGTGCAAAGAGGTGCTGGCCTCCAAGCGC
AAGTCCAAGCAGAGTCTGCTGGAAAGGATGCTCGGTGGAGCACGACCCTA
CAGCCGAGGGAAGAGCGACAGCAATTTGCCAAAAGACGCAAGCTTTCTAG
ACCAT
BO26583.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8519-RA | 624 | CG8519-PA | 1..621 | 17..637 | 3105 | 100 | Plus |
| CG8519-RB | 456 | CG8519-PB | 1..453 | 185..637 | 2265 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8519-RA | 1303 | CG8519-RA | 624..1244 | 17..637 | 3105 | 100 | Plus |
| CG8519-RB | 709 | CG8519-RB | 117..650 | 104..637 | 2670 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 6708538..6708941 | 234..637 | 2020 | 100 | Plus |
| 3L | 28110227 | 3L | 6708348..6708480 | 104..236 | 665 | 100 | Plus |
| 3L | 28110227 | 3L | 6705483..6705570 | 17..104 | 440 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:00:43 has no hits.
BO26583.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:18 Download gff for
BO26583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8519-RA | 1..621 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:09 Download gff for
BO26583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8519-RA | 624..1244 | 17..639 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:32 Download gff for
BO26583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG8519-RA | 624..1244 | 17..639 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:32 Download gff for
BO26583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 6705483..6705570 | 17..104 | 100 | -> | Plus |
| 3L | 6708349..6708479 | 105..235 | 100 | -> | Plus |
| 3L | 6708540..6708941 | 236..639 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:09 Download gff for
BO26583.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 6701449..6701579 | 105..235 | 100 | -> | Plus |
| arm_3L | 6698583..6698670 | 17..104 | 100 | -> | Plus |
| arm_3L | 6701640..6702041 | 236..639 | 99 | | Plus |
BO26583.pep Sequence
Translation from 16 to 655
> BO26583.pep
MTTRGIRCKKSTLTELKIAVIGAPSVGKSALIVRFLTKRYIGEYDHQTEN
RYKHEAMVDGEPVLFEILDTCPKAEDEYPNAAELVQWADGLLLVYSITDR
KSFNYIRRAKSDLQSDTPVQLCANKVDMVHLRQVSRDEGEILAKDFECKF
SEVSAADHVDQVAEVFNELCKEVLASKRKSKQSLLERMLGGARPYSRGKS
DSNLPKDASFLDH
BO26583.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG8519-PA | 207 | CG8519-PA | 1..207 | 1..207 | 1061 | 100 | Plus |
| CG8519-PB | 151 | CG8519-PB | 1..151 | 57..207 | 775 | 100 | Plus |
| CG5160-PB | 328 | CG5160-PB | 23..194 | 16..169 | 264 | 36.6 | Plus |
| CG5160-PA | 328 | CG5160-PA | 23..194 | 16..169 | 264 | 36.6 | Plus |
| Rap2l-PA | 182 | CG3204-PA | 1..175 | 13..183 | 237 | 34.4 | Plus |
