BO26585.complete Sequence
850 bp assembled on 2010-07-01
GenBank Submission: KX796703
> BO26585.complete
GAAGTTATCAGTCGACATGGCGCGCAATGCAGAGAAGGCAATGACAACTT
TGGCACGTTGGCGGGCCGCAAAAGAAGTGGAATCTGGTGAAAAGGAACGC
CGGCCCTATTTGGCCTCCGAGTGCCACGATTTGCCCAGATGTGAGAAGTT
CCGCCTGGAGATAATACGCGACATATCGAAGAAGGTGGCCCAGATACAGA
ATGCTGGCTTGGGAGAATTCCGGATTCGCGATCTGAACGATGAAATCAAC
AAGTTATTGCGTGAGAAACGGCATTGGGAAAATCAGATATCCTCATTGGG
TGGCCCCCACTATAGACGCTATGGTCCCAAGATGTTCGATGCGGAGGGCC
GTGAAGTTCCCGGCAATCGAGGCTACAAATACTTTGGAGCCGCCAAGGAT
CTGCCGGGTGTTCGCGAGCTCTTTGAACAGGATCCTCCGCCGCCACCCAG
GAAATCACGCGCTGAACTAATGAAGGACATAGATGCCGAATACTACGGCT
ATCGAGATGACGAAGATGGTGTTCTGATCCCTCTGGAGGAACGCATCGAA
CGAGCGGCCATTCAGAAGGCCGTGCAGGAATGGCGGGAGAAAATGGCCAG
AGATGGTCGCATAATCGATGACGAAGAGGAGGATGAAATATATCCCCTTT
CGGGACCAGCACGCGAAGCCATCGAGGATGCCAAGGCTCGAGCCGCCGTG
GAGGATCCTCATGGCCTATTGGCATCCAAGTTCACCGCTCACGTTCCCGT
GCCGACGCAACAAGATGTACAGGAAGCACTGCTGCGCCAGCGGAAACGGG
AACTGCTGGAGAAATACGCCGGTGGCACTAACGCAAGCTTTCTAGACCAT
BO26585.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-RA | 819 | CG9667-PA | 1..816 | 17..832 | 4080 | 100 | Plus |
| CG9667-RB | 795 | CG9667-PB | 1..792 | 41..832 | 3960 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:28
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-RA | 883 | CG9667-RA | 43..858 | 17..832 | 4080 | 100 | Plus |
| CG9667-RB | 838 | CG9667-RB | 1..813 | 20..832 | 4065 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 8125315..8125944 | 832..203 | 3150 | 100 | Minus |
| 3R | 32079331 | 3R | 8126005..8126165 | 203..43 | 805 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:00:26 has no hits.
BO26585.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:15 Download gff for
BO26585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 19..834 | 17..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:01 Download gff for
BO26585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 43..858 | 17..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:27 Download gff for
BO26585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG9667-RA | 43..858 | 17..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:27 Download gff for
BO26585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 8125313..8125943 | 204..834 | 99 | <- | Minus |
| 3R | 8126005..8126165 | 43..203 | 100 | <- | Minus |
| 3R | 8126229..8126253 | 17..42 | 96 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:01 Download gff for
BO26585.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 3951727..3951887 | 43..203 | 100 | <- | Minus |
| arm_3R | 3951951..3951975 | 17..42 | 96 | | Minus |
| arm_3R | 3951035..3951665 | 204..834 | 99 | <- | Minus |
BO26585.pep Sequence
Translation from 16 to 850
> BO26585.pep
MARNAEKAMTTLARWRAAKEVESGEKERRPYLASECHDLPRCEKFRLEII
RDISKKVAQIQNAGLGEFRIRDLNDEINKLLREKRHWENQISSLGGPHYR
RYGPKMFDAEGREVPGNRGYKYFGAAKDLPGVRELFEQDPPPPPRKSRAE
LMKDIDAEYYGYRDDEDGVLIPLEERIERAAIQKAVQEWREKMARDGRII
DDEEEDEIYPLSGPAREAIEDAKARAAVEDPHGLLASKFTAHVPVPTQQD
VQEALLRQRKRELLEKYAGGTNASFLDH
BO26585.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:19
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG9667-PA | 272 | CG9667-PA | 1..272 | 1..272 | 1423 | 100 | Plus |
| CG9667-PB | 264 | CG9667-PB | 1..264 | 9..272 | 1385 | 100 | Plus |
