BO26596.complete Sequence
691 bp assembled on 2010-07-01
> BO26596.complete
GAAGTTATCAGTCGACATGTTAAATTCACACAACACAAACCACAATAACA
ACAGCGCCAGCAACAGCAACTACAACAAAGGCCACAAAATGCATTTGAAA
AGTGCAACGGCAAAAGCAACAATAATGAAACATAAGTTAAGCAAATTTTA
CGGATACGGTTGGATGCAAGTCTTCCTACTACTTACAGTCCTCGTGATTG
GTAATCAAAGTGCCTGGCAGGAGAATATACGACCAAAACTCTACGTTGAA
TTAGGTCCCGAAGATGTACTGAAGTTTGTGGGAAACGAAAGTGTTGTGGA
TCACTTCAAGCTCGTCACCAAGGATGGCAACAGTCTGCTCATCGGTGCCA
GAAACACGGTTTTTAATTTAAGCATACACGATCTCGTCGAGCAGCAGCGA
TTGGTCTGGACATCGCCGGAGGATGATACCAAAATGTGTCTCGTCAAGGG
CAAGGATGAGGAGGCCTGCCAGAACTACATCCGCATCATGGTGGTGCCAT
CGCCGGGTCGCCTTTTCGTTTGTGGCACCAACTCGTTCCGGCCCATGTGC
AACACGTATATCATTAGTGACAGCAACTACACGCTGGAGGCCACGAAGAA
CGGACAGGCGGTGTGCCCCTACGATCCGCGTCACAACTCCACCTCTGTGC
TGGCCGGTAAGTGTGCTAAAATTGCAAGCTTTCTAGACCAT
BO26596.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:00:31
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sema-1a-RF | 2481 | CG18405-PF | 1..640 | 17..656 | 3200 | 100 | Plus |
Sema-1a-RE | 2718 | CG18405-PE | 1..640 | 17..656 | 3200 | 100 | Plus |
Sema-1a-RD | 2718 | CG18405-PD | 1..640 | 17..656 | 3200 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:00:32
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sema-1a-RF | 7980 | CG18405-RF | 1397..2036 | 17..656 | 3200 | 100 | Plus |
Sema-1a-RE | 9624 | CG18405-RE | 1077..1716 | 17..656 | 3200 | 100 | Plus |
Sema-1a-RD | 9706 | CG18405-RD | 1283..1922 | 17..656 | 3200 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:00:29
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 8564059..8564298 | 17..256 | 1200 | 100 | Plus |
2L | 23513712 | 2L | 8645025..8645239 | 459..673 | 1075 | 100 | Plus |
2L | 23513712 | 2L | 8640584..8640696 | 349..461 | 565 | 100 | Plus |
2L | 23513712 | 2L | 8631025..8631123 | 253..351 | 495 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:00:30 has no hits.
BO26596.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:03:16 Download gff for
BO26596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sema-1a-RC | 1399..2050 | 22..675 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:08:04 Download gff for
BO26596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sema-1a-RD | 1288..1926 | 22..660 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:19:28 Download gff for
BO26596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Sema-1a-RD | 1288..1926 | 22..660 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:19:28 Download gff for
BO26596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 8564064..8564296 | 22..254 | 100 | -> | Plus |
2L | 8631027..8631123 | 255..351 | 100 | -> | Plus |
2L | 8640587..8640695 | 352..460 | 100 | -> | Plus |
2L | 8645027..8645239 | 461..675 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:08:04 Download gff for
BO26596.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 8564064..8564296 | 22..254 | 100 | -> | Plus |
arm_2L | 8631027..8631123 | 255..351 | 100 | -> | Plus |
arm_2L | 8640587..8640695 | 352..460 | 100 | -> | Plus |
arm_2L | 8645027..8645239 | 461..675 | 99 | | Plus |
BO26596.pep Sequence
Translation from 16 to 691
> BO26596.pep
MLNSHNTNHNNNSASNSNYNKGHKMHLKSATAKATIMKHKLSKFYGYGWM
QVFLLLTVLVIGNQSAWQENIRPKLYVELGPEDVLKFVGNESVVDHFKLV
TKDGNSLLIGARNTVFNLSIHDLVEQQRLVWTSPEDDTKMCLVKGKDEEA
CQNYIRIMVVPSPGRLFVCGTNSFRPMCNTYIISDSNYTLEATKNGQAVC
PYDPRHNSTSVLAGKCAKIASFLDH
BO26596.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:21:20
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Sema-1a-PI | 817 | CG18405-PI | 1..213 | 1..213 | 1134 | 100 | Plus |
Sema-1a-PH | 820 | CG18405-PH | 1..213 | 1..213 | 1134 | 100 | Plus |
Sema-1a-PF | 826 | CG18405-PF | 1..213 | 1..213 | 1134 | 100 | Plus |
Sema-1a-PA | 899 | CG18405-PA | 1..213 | 1..213 | 1134 | 100 | Plus |
Sema-1a-PE | 905 | CG18405-PE | 1..213 | 1..213 | 1134 | 100 | Plus |