BO26695.complete Sequence
484 bp assembled on 2010-07-01
GenBank Submission: KX798978
> BO26695.complete
GAAGTTATCAGTCGACATGGATAACAAGAGCGAGAAGGTTACGGTGAACA
AGGAGGAGCTGCGCAAGCGCCTGACCCCGGTGCAGTATCAGGTTACCCAG
GAGGCGGGCACCGAGCGACCCTTCACAGGTTGCTACAACAAACACTACGA
GAAGGGCGTGTACCAGTGCATCGTGTGCCACCAGGATCTGTTCAGCTCGG
AGACCAAGTACGACTCGGGATGCGGATGGCCGGCCTTCAACGATGTCCTA
GACAAGGGCAAGGTCACGCTGCACCGCGATGCCAGCATACCAGGCATGGT
GCGCACCGAGGTGCGCTGCTCCCGATGCTCCGCCCATATGGGCCACGTCT
TCGATGATGGACCGCCGCCCAAGCATCGACGCTTCTGCATCAATTCCGCG
TCCATCGATTTCGTGAAGAGTGCGACGCCATCGAAGGCGGATCCATCGAC
GGCCTCGTCCAAGAAAGCAAGCTTTCTAGACCAT
BO26695.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:03:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SelR-RJ | 579 | CG6584-PJ | 127..576 | 17..466 | 2250 | 100 | Plus |
| SelR-RH | 453 | CG6584-PH | 1..450 | 17..466 | 2250 | 100 | Plus |
| SelR-RG | 474 | CG6584-PG | 1..471 | 17..466 | 2005 | 95.5 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:03:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SelR-RJ | 2392 | CG6584-RJ | 376..825 | 17..466 | 2250 | 100 | Plus |
| SelR-RH | 2277 | CG6584-RH | 261..710 | 17..466 | 2250 | 100 | Plus |
| SelR-RG | 2298 | CG6584-RG | 261..731 | 17..466 | 2005 | 95.5 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:03:01
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 10865454..10865628 | 466..292 | 875 | 100 | Minus |
| 3R | 32079331 | 3R | 10866528..10866698 | 294..124 | 855 | 100 | Minus |
| 3R | 32079331 | 3R | 10866807..10866920 | 130..17 | 570 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:03:02 has no hits.
BO26695.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-01 14:04:04 Download gff for
BO26695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SelR-RH | 276..725 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:09:21 Download gff for
BO26695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SelR-RH | 261..710 | 17..468 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:20:33 Download gff for
BO26695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| SelR-RH | 261..710 | 17..468 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:20:33 Download gff for
BO26695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 10865452..10865626 | 294..468 | 98 | <- | Minus |
| 3R | 10866529..10866693 | 129..293 | 100 | <- | Minus |
| 3R | 10866809..10866920 | 17..128 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:09:21 Download gff for
BO26695.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 6691174..6691348 | 294..468 | 98 | <- | Minus |
| arm_3R | 6692251..6692415 | 129..293 | 100 | <- | Minus |
| arm_3R | 6692531..6692642 | 17..128 | 100 | | Minus |
BO26695.pep Sequence
Translation from 16 to 484
> BO26695.pep
MDNKSEKVTVNKEELRKRLTPVQYQVTQEAGTERPFTGCYNKHYEKGVYQ
CIVCHQDLFSSETKYDSGCGWPAFNDVLDKGKVTLHRDASIPGMVRTEVR
CSRCSAHMGHVFDDGPPPKHRRFCINSASIDFVKSATPSKADPSTASSKK
ASFLDH
BO26695.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:24:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| SelR-PH | 150 | CG6584-PH | 1..150 | 1..150 | 817 | 100 | Plus |
| SelR-PJ | 192 | CG6584-PJ | 43..192 | 1..150 | 817 | 100 | Plus |
| SelR-PG | 157 | CG6584-PG | 1..157 | 1..150 | 799 | 95.5 | Plus |
| SelR-PI | 155 | CG6584-PI | 1..150 | 1..151 | 690 | 83.4 | Plus |
| SelR-PA | 155 | CG6584-PA | 1..150 | 1..151 | 690 | 83.4 | Plus |
