BO26706.complete Sequence
1063 bp assembled on 2010-08-18
GenBank Submission: KX796654
> BO26706.complete
GAAGTTATCAGTCGACATGCTGGCTCATAACCTAGGTTTCCATAAAAAGC
GCCTTTTTTCAAACATGAAGGCTGTTTTACAGGATCGGGGTGTCATAGGC
TTATCCCTCGAAGAATGCGATTTGGAAAGAACTTTGCTTGGAGGACAGAG
TTTCCGATGGCGATCCATATGCGATGGTAATAGAACGAAATATGGCGGAG
TGGTGTTCAACACCTACTGGGTGCTCCAGCAAGAAGAATCCTTCATAACT
TACGAGGCATACGGAACCAGCAGTCCTTTGGCCACGAAGGACTATTCTTC
CTTGATATCTGACTACCTACGTGTTGATTTCGACCTAAAGGTCAACCAAA
AAGATTGGTTAAGCAAAGATGATAACTTTGTGAAGTTCTTGAGTAAGCCT
GTGCGCCTCCTTTCTCAGGAGCCGTTCGAAAACATTTTTAGCTTCCTTTG
CAGTCAGAACAATAACATCAAGCGCATATCATCTATGATTGAATGGTTTT
GCGCTACATTTGGCACCAAGATTGGTCACTTCAATGGTGCCGATGCGTAT
ACATTTCCCACGATAAATAGATTCCACGACATCCCATGCGAGGATCTTAA
TGCCCAGCTAAGGGCTGCCAAGTTCGGTTATCGGGCCAAGTTCATAGCAC
AAACGCTGCAAGAGATCCAGAAAAAGGGGGGACAAAACTGGTTCATAAGC
CTAAAGAGCATGCCGTTCGAAAAAGCTCGCGAGGAGCTGACACTGCTACC
CGGAATCGGATACAAAGTGGCCGATTGCATCTGCCTTATGTCAATGGGTC
ACTTGGAGTCAGTGCCCGTCGACATTCATATTTACAGAATTGCCCAAAAT
TACTACCTGCCACATCTAACCGGCCAAAAGAACGTAACCAAGAAGATTTA
CGAAGAGGTCTCGAAACATTTTCAAAAGCTACACGGAAAGTATGCCGGTT
GGGCTCAAGCTATTCTCTTTTCTGCCGATTTGAGTCAATTTCAAAATACT
TCCACAGTTGCTTGTAAGAAAAAATCCAATAAAAAACCTAAAAAGGCAAG
CTTTCTAGACCAT
BO26706.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:55:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-RA | 1032 | CG1795-PA | 1..1029 | 17..1045 | 5145 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:55:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-RA | 1307 | CG1795-RA | 162..1190 | 17..1045 | 5145 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:55:49
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 8691064..8691551 | 474..961 | 2440 | 100 | Plus |
| X | 23542271 | X | 8690685..8691003 | 156..474 | 1595 | 100 | Plus |
| X | 23542271 | X | 8690488..8690627 | 17..156 | 700 | 100 | Plus |
| X | 23542271 | X | 8691611..8691694 | 962..1045 | 420 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:55:50 has no hits.
BO26706.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:47 Download gff for
BO26706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 160..1188 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:52 Download gff for
BO26706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 162..1190 | 17..1047 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:38 Download gff for
BO26706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| Ogg1-RA | 162..1190 | 17..1047 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:38 Download gff for
BO26706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 8690488..8690627 | 17..156 | 100 | -> | Plus |
| X | 8690686..8691003 | 157..474 | 100 | -> | Plus |
| X | 8691065..8691551 | 475..961 | 100 | -> | Plus |
| X | 8691611..8691694 | 962..1047 | 97 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:52 Download gff for
BO26706.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 8584521..8584660 | 17..156 | 100 | -> | Plus |
| arm_X | 8584719..8585036 | 157..474 | 100 | -> | Plus |
| arm_X | 8585098..8585584 | 475..961 | 100 | -> | Plus |
| arm_X | 8585644..8585727 | 962..1047 | 97 | | Plus |
BO26706.pep Sequence
Translation from 16 to 1063
> BO26706.pep
MLAHNLGFHKKRLFSNMKAVLQDRGVIGLSLEECDLERTLLGGQSFRWRS
ICDGNRTKYGGVVFNTYWVLQQEESFITYEAYGTSSPLATKDYSSLISDY
LRVDFDLKVNQKDWLSKDDNFVKFLSKPVRLLSQEPFENIFSFLCSQNNN
IKRISSMIEWFCATFGTKIGHFNGADAYTFPTINRFHDIPCEDLNAQLRA
AKFGYRAKFIAQTLQEIQKKGGQNWFISLKSMPFEKAREELTLLPGIGYK
VADCICLMSMGHLESVPVDIHIYRIAQNYYLPHLTGQKNVTKKIYEEVSK
HFQKLHGKYAGWAQAILFSADLSQFQNTSTVACKKKSNKKPKKASFLDH
BO26706.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:22:43
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Ogg1-PA | 343 | CG1795-PA | 1..343 | 1..343 | 1821 | 100 | Plus |
