BO26713.complete Sequence
1903 bp assembled on 2010-09-13
GenBank Submission: KX799146
> BO26713.complete
GAAGTTATCAGTCGACATGGAACAGTCGCAGAACTTACTCGCCAAACAGT
CCAAAAATGTGGAGTTCCAAGATGTGTACTACACCGTCAAGGAGCGCAAG
AATTTCTGGCGCGTAACCGGTGAGCGTCGAATTCTGAATGGAGTCAGCGG
CAGTTTCCGGAATGGTCAACTTTCGGCAATCATGGGACCCTCAGGAGCCG
GAAAAAGCAGTTTGCTTAATGCGATTTCGGGTTTCAGACGCGACGGAGTC
ACTGGGAACATCAAGATGAAGCGGGACAATGCCTGCTATATCACTCAGGA
CGACCACCACCAGACCCTGCTGACTGTCGAGGAGCTTATGAATCTCGCCT
GCGATCTCAAGTTAAAGAATCGTCACAAAAAGGCTGAAATCATGACCGAT
ATATTGGAGAATCTGCACTTGAATCACCGGCGCAATGTGACGGCAGAGAA
GTTGAGTGGCGGGGAGCGTAAGCGATTGTCCATCGCCCTGGAGCTGGTGG
ACAATCCAAACATATTCTTCTTGGACGAACCAACCAGTGGCCTGGACGAA
GTGACAGCGGCCCAGTGCATCCGTTTGCTGCAGGCGATGGCATACGAGGG
TCGCACCATCGTTTGCACCATCCATCAACCTTCGGCCACGATATACAACT
ACTTCGATAGCATCTACGTCCTGGCCAAGGGCCAATGTGTCTACCAAGGC
AGTCCCAGAGCCACCATTCCCTTTCTGCGATTGGCCCAGCTGGATTGCCC
CAGGCATTACAGTCCTTCGGATTATATTATTGAGCTGGTGGATGCCGAGG
ATGGACACCTGGTGCCAGCACTCAGCGACCTAACCGAAAACGGGAAGCTG
ATCTATGTGGTCAGTCAGTCTGAGCAATTGGCACCTCAGCAGGCGGTCAC
CACAATGTTTCTGGAGCAACAGAAGCGTCCATTCTTGCCCGCCTTTTTCG
CTGGCAGCGCCGCCTCCACGGATGGAACGCTAATTGGAGGCACCAGTGCT
CTGTTGGAGCAAGTGAAGGCCTTCTCGAAGAGACTCCATACGGATCGGCG
GGATGTATGTGGGTTTCGTCAGTTTATCGTTCTTATGCGAATAATGCTAC
TGAGAATAACGCGTGCTCGTTTGGCACTGACCATCCAATTGTTCCATCAC
CTGCTGTGCGGTCTGTTCTTTGGCCTGATATTCTTCCAACTGGGCAACCA
AGGTGCCCGGATGTTCGATCATCTGAAATTCTGCATCGGCGCCGTCCTCA
TGATCGTGTACACCCAGGTGATGGTGCCCATTTTGAGCTATCCCGCTGAG
GTGAAACTGGTCAAGAAGGAGACCTTTAATCGTTGGTATACCCTCACCCC
GTACTACATGGCCCTCACAGTTTCGCGACTGCCAGTTCAAGTGCTACTCA
ACATCACCTTCATGGCTGTCACGTACTGGATGTCCGGATTGCCGCAGCAG
TTCTGGCGCTTCTGCATTTTTGTGGCTGTGGGTTTGATGATCTCATTGGT
GGCCGAGGGAATGGGCCTGGCAATTGGAGCCACCTTCAGCATTACGAATG
GCAGTGTGGTGGGTCCGATGCTAATAGCTCCTCTGATGGGTTTGGCCGTC
TACGGATTTGACTTTGCGCCGCAGGTATCCGGCGGAATGCAACTGCTGAT
GAAATTCAGCTATGTGCGTGTGGGCGTGGTTTCGTTGGTTTTAGCCGTCT
TCGGATTTCAGCGGGAAGAACTCGACTGCGATGCGATATACTGTCATTTT
AGCGATCCTCGCGTGCTGCTCAAATTTTTGGATGTGGAAAAGGTGTCGAT
GCTCCATCAGTTCGGATTGCTGGCCATGCTGATGCTGTTCTTCCGAGTGA
TGATGTACATCAGCCTGCGAAAGCGATGCTATGCCGCAAGCTTTCTAGAC
CAT
BO26713.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:59:25
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32091-RB | 1872 | CG32091-PB | 1..1869 | 17..1885 | 9345 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:59:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32091-RB | 2967 | CG32091-RB | 680..2555 | 10..1885 | 9365 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:59:23
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 11640651..11641195 | 232..776 | 2725 | 100 | Plus |
| 3L | 28110227 | 3L | 11641261..11641773 | 777..1289 | 2565 | 100 | Plus |
| 3L | 28110227 | 3L | 11642151..11642490 | 1546..1885 | 1700 | 100 | Plus |
| 3L | 28110227 | 3L | 11641833..11642089 | 1290..1546 | 1285 | 100 | Plus |
| 3L | 28110227 | 3L | 11640068..11640197 | 108..237 | 650 | 100 | Plus |
| 3L | 28110227 | 3L | 11635094..11635192 | 10..108 | 480 | 99 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:59:24 has no hits.
BO26713.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-16 10:43:07 Download gff for
BO26713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32091-RB | 684..2552 | 17..1887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:18 Download gff for
BO26713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32091-RB | 687..2555 | 17..1887 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:40 Download gff for
BO26713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG32091-RB | 687..2555 | 17..1887 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:40 Download gff for
BO26713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 11640068..11640197 | 108..237 | 100 | -> | Plus |
| 3L | 11635101..11635191 | 17..107 | 100 | -> | Plus |
| 3L | 11640657..11641195 | 238..776 | 100 | -> | Plus |
| 3L | 11641261..11641773 | 777..1289 | 100 | -> | Plus |
| 3L | 11641833..11642089 | 1290..1546 | 100 | -> | Plus |
| 3L | 11642152..11642490 | 1547..1887 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:18 Download gff for
BO26713.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 11628201..11628291 | 17..107 | 100 | -> | Plus |
| arm_3L | 11633168..11633297 | 108..237 | 100 | -> | Plus |
| arm_3L | 11633757..11634295 | 238..776 | 100 | -> | Plus |
| arm_3L | 11634361..11634873 | 777..1289 | 100 | -> | Plus |
| arm_3L | 11634933..11635189 | 1290..1546 | 100 | -> | Plus |
| arm_3L | 11635252..11635590 | 1547..1887 | 99 | | Plus |
BO26713.pep Sequence
Translation from 16 to 1903
> BO26713.pep
MEQSQNLLAKQSKNVEFQDVYYTVKERKNFWRVTGERRILNGVSGSFRNG
QLSAIMGPSGAGKSSLLNAISGFRRDGVTGNIKMKRDNACYITQDDHHQT
LLTVEELMNLACDLKLKNRHKKAEIMTDILENLHLNHRRNVTAEKLSGGE
RKRLSIALELVDNPNIFFLDEPTSGLDEVTAAQCIRLLQAMAYEGRTIVC
TIHQPSATIYNYFDSIYVLAKGQCVYQGSPRATIPFLRLAQLDCPRHYSP
SDYIIELVDAEDGHLVPALSDLTENGKLIYVVSQSEQLAPQQAVTTMFLE
QQKRPFLPAFFAGSAASTDGTLIGGTSALLEQVKAFSKRLHTDRRDVCGF
RQFIVLMRIMLLRITRARLALTIQLFHHLLCGLFFGLIFFQLGNQGARMF
DHLKFCIGAVLMIVYTQVMVPILSYPAEVKLVKKETFNRWYTLTPYYMAL
TVSRLPVQVLLNITFMAVTYWMSGLPQQFWRFCIFVAVGLMISLVAEGMG
LAIGATFSITNGSVVGPMLIAPLMGLAVYGFDFAPQVSGGMQLLMKFSYV
RVGVVSLVLAVFGFQREELDCDAIYCHFSDPRVLLKFLDVEKVSMLHQFG
LLAMLMLFFRVMMYISLRKRCYAASFLDH
BO26713.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:27:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG32091-PB | 623 | CG32091-PB | 1..623 | 1..623 | 3201 | 100 | Plus |
| CG3164-PD | 698 | CG3164-PD | 36..691 | 5..618 | 1022 | 34.9 | Plus |
| CG3164-PB | 698 | CG3164-PB | 36..691 | 5..618 | 1022 | 34.9 | Plus |
| CG3164-PC | 699 | CG3164-PC | 37..692 | 5..618 | 1022 | 34.9 | Plus |
| CG3164-PA | 699 | CG3164-PA | 37..692 | 5..618 | 1022 | 34.9 | Plus |
