Clone BO26718 Report

Search the DGRC for BO26718

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:267
Well:18
Vector:pDNR-Dual
Associated Gene/TranscriptCG9184-RA
Protein status:BO26718.pep: Imported from assembly
Sequenced Size:760

Clone Sequence Records

BO26718.complete Sequence

760 bp assembled on 2010-08-18

GenBank Submission: KX798595

> BO26718.complete
GAAGTTATCAGTCGACATGGATCGGAGAGTGACTGCGATTGGTTTGGTTA
TCCTGCAGCTGCTGGTCAGCGGCCTCTGTTTCCAGGAGAAGGCGCCACTG
CAGACGAGCCTGGTCAGCGGACAGGCCAGGACCGAAAAGCAGCAACAGGT
GCTGGACGATCCGCTGGGAAGTGGACGCGGGATTGACGAGCACCTGCTGA
AGACCATTGGTAAGGGCGGCATCAAGCTGGTGATGGCCTCGGGAGCCCCG
TCGACCACCCCGAAACCGTCAGTACAACACCATTACTATTATCCACCAGA
GGATCAGCAGCACCCACGGCAGTATGGCTATCCACCGCAGTGGTCGCCAG
GACCGCCCGCTTATCCGCCGCCACCGCAGCGTCCTTGGGGGCCACCCCCT
CCGCCCGGACCACCGCCGCCAGGACCTCCTCCTCCGCCGGGACCCTACTA
CAATCCCTACTACAATGGCTACAACTACTACGGCGGATATGGCGGCTATG
GATATGGGGGCTTTGGATATCCCGGCTTTGGCGGCTATTCTGGCTATCCC
TACTATCCCTTCTATCGCTCCTCGACGGCTGGCGAGGTCGATAACCAACT
TCCCGGTGCCGATGGACTCACTTCCGCCGCCATTCCTGGCGTTTTCCAGG
GCAGGGCCGTGCTGTCCCACCAGAACTTCCTCGACGGCAGGAACAACGCT
AACGTTGTGCCACTTTATCACCTACTCCAAATGGCCAGGGCTGCAAGCTT
TCTAGACCAT

BO26718.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:55:59
Subject Length Description Subject Range Query Range Score Percent Strand
CG9184-RA 729 CG9184-PA 1..726 17..742 3630 100 Plus
CG9184-RB 639 CG9184-PB 193..636 299..742 2220 100 Plus
CG9184-RB 639 CG9184-PB 1..193 17..209 965 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:56:01
Subject Length Description Subject Range Query Range Score Percent Strand
CG9184-RA 966 CG9184-RA 24..750 16..742 3635 100 Plus
CG9184-RB 876 CG9184-RB 217..660 299..742 2220 100 Plus
CG9184-RB 876 CG9184-RB 24..217 16..209 970 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:55:57
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 1322008..1322703 742..47 3480 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:55:58 has no hits.

BO26718.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:53 Download gff for BO26718.complete
Subject Subject Range Query Range Percent Splice Strand
CG9184-RA 21..746 17..744 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:31:57 Download gff for BO26718.complete
Subject Subject Range Query Range Percent Splice Strand
CG9184-RA 25..750 17..744 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:42 Download gff for BO26718.complete
Subject Subject Range Query Range Percent Splice Strand
CG9184-RA 25..750 17..744 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:42 Download gff for BO26718.complete
Subject Subject Range Query Range Percent Splice Strand
3L 1322005..1322702 48..744 99 <- Minus
3L 1322752..1322782 17..47 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:31:57 Download gff for BO26718.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 1322005..1322702 48..744 99 <- Minus
arm_3L 1322752..1322782 17..47 100   Minus

BO26718.pep Sequence

Translation from 16 to 760

> BO26718.pep
MDRRVTAIGLVILQLLVSGLCFQEKAPLQTSLVSGQARTEKQQQVLDDPL
GSGRGIDEHLLKTIGKGGIKLVMASGAPSTTPKPSVQHHYYYPPEDQQHP
RQYGYPPQWSPGPPAYPPPPQRPWGPPPPPGPPPPGPPPPPGPYYNPYYN
GYNYYGGYGGYGYGGFGYPGFGGYSGYPYYPFYRSSTAGEVDNQLPGADG
LTSAAIPGVFQGRAVLSHQNFLDGRNNANVVPLYHLLQMARAASFLDH

BO26718.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:26
Subject Length Description Subject Range Query Range Score Percent Strand
CG9184-PA 242 CG9184-PA 1..242 1..242 1363 100 Plus
CG9184-PB 212 CG9184-PB 1..212 1..242 1155 87.6 Plus
CG33003-PA 579 CG33003-PA 397..500 73..155 153 32.7 Plus
CG33003-PB 604 CG33003-PB 422..525 73..155 153 32.7 Plus
CG10555-PB 926 CG10555-PB 405..533 41..178 149 32.9 Plus