Clone BO26722 Report

Search the DGRC for BO26722

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:267
Well:22
Vector:pDNR-Dual
Associated Gene/TranscriptCG18088-RA
Protein status:BO26722.pep: Imported from assembly
Sequenced Size:2023

Clone Sequence Records

BO26722.complete Sequence

2023 bp assembled on 2010-09-13

GenBank Submission: KX794814

> BO26722.complete
GAAGTTATCAGTCGACATGGAGTTGAGAATTTGTTCCAGCTATTCGCTCT
ACAAGTTTCTCGCCCTGTGCTGCTTTTTGACCATCGTGCTTTTTCTAATA
TATTCATCGAATACTTCTTCGAATACAAATCATGATTTATATCCGCCTAC
TACGCGATTTTCTCGAGTTTCGGTAAAGGCTGAACCGCAGAAATTCTTTG
TGAAAACATCCAAGTGCCATATACCCTATGTGGATCCTTTCAACGACGAA
GCCATGGAGTTGTACAAACCGCAAACACTAATCACCTGCTCGAATGAGAC
CGATCTCATATCAACAACATACAATGAAATTATCAAACGGCATATTCTGC
ACATCGACGATGAAGTCGCTCAAAAATTGCTTAATTTCACAGACAAGGAC
TATAATTGCTTTTACCGCGAAATCAAATATGGAAAGATTGCAGATACCTA
CGACAATCTCAAGGCCAAAAAATATTTCACGAGTGGTTACGAGGTGCCAG
TTCATGTGGAGGGAATGATCGTCGAGTGCCAGACGGCTGATGATCCGATA
GTTGTCCTTCAGAAGGACGCCTTCGCCTTCATCCAGCATCGGCCGTTGCC
CAAGGACTCCATAAGACCCAGGGCAGCTCGGAAGCCAAGCGTGATAATGT
ACGGTATCGACTCTCTTTCCCGAATAAACTTAAGACGCACTATGCCCAAG
GTTTTTAACTTTCTACAGGGCCCAGGATGGTACGAGATGCAAGGATACAA
TAAGGTTGCCGACAACTCATTCCCCAACATACTCGCTATTCTCAGTGGAT
ATTCAGCTAGTACGGCTAAGGAAAATGTCTGCGATACGGATAAACAGGGC
TGCCTGGACGAGATGCCAATGATATGGAAGTATTTCAAGAATGCCAGCTA
TTTGACAGGATACGCGGAGGACGAGAGTAACTCTAATCATTTCAACTACC
TAAAGCCCGGCTTTTCCAAAAAGCCGATGGACTATTACTTTCGCCCATTG
CTTAGAGCACTGGAGTCCGAAATGGATGTGTACCGATTGCCGGAACATGA
CTACATGCGATACTGTTTGGGTCGCCGGATAGCGAATCGTTATATCTACG
ACTATGGCCTACAGTTCACGAAGCGTTTTGTTCACGATCGACCAATTTGG
GGAATGTTTTGGTCGAATCACTTCAGTCACGATGATCCCTTTATGCCATC
AGCAATGCAGGAAAAGGTGCTGGGAGATTTGATCGATATGCATGCGGATG
GGCAATTCGAAGAAATGATAATGATATTTTTCGCCGACCACGGAACCAGA
TTTGGCGATTTGACCTATCTGAAGGAGGGCTTTCTGGAGGAGCGGCTGCC
CATGATGTTTATATATCTGCCCCCGTGGTTTCGTGAAACATATCCATCTT
ATGTAAGGGCACTGGAGTTGAATCAGCACAGGCTTAGTTCCAACTTTGAT
CTTCACAATACGCTGAAACATATCATAGAGATTGGAGGCACCCCAGATGG
TCGAGAGTTACCCAAGTCCTTCGATTGCCCCACCTGTCAGTCGCTATTCT
ATCCCCTGCCGGAGGGTCGAACGTGTTCGGAAGCCGGCATTGAGGAGCAC
TGGTGCACCTGCGAACCCTACAAGATTATCTCGGGACAAGATTGGACGAC
TCCTATTGCCCACAGTGTGATCGATCGAATGAACGAGTATTTCGTTCAAA
AGAACTTAACCAGTCTTTGCAGCAATCTGACGCTAAATTATGTGCATAAG
ACTGAGATAAAAACCGGTCTTAACATCGATTGGCACCAAACACTGATGGA
ATCGGAAACAGCGGTTTATCGTATTAAGTTTAAAGTGAAGCAGAATAGTG
CTGACTTCCAGGCCACAGTGGTATACCATAATTCCACCCAAAATGCTCAA
GTAAATGTGGAGAAAATCAGCAGAACGAATTCATACAAGGAAGACTCCAC
ATGCATCGATGATAAGCTTGCAAAACTATATTGTATTTGCTTTAGTGACC
TCCACGCAAGCTTTCTAGACCAT

BO26722.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:59:20
Subject Length Description Subject Range Query Range Score Percent Strand
CG18088-RC 1992 CG18088-PC 1..1989 17..2005 9930 99.9 Plus
CG18088-RB 1992 CG18088-PB 1..1989 17..2005 9930 99.9 Plus
CG18088-RA 1992 CG18088-PA 1..1989 17..2005 9930 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:59:21
Subject Length Description Subject Range Query Range Score Percent Strand
CG18088-RC 2628 CG18088-RC 35..2024 16..2005 9935 99.9 Plus
CG18088-RB 2044 CG18088-RB 35..2024 16..2005 9935 99.9 Plus
CG18088-RA 2260 CG18088-RA 35..2024 16..2005 9935 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:59:17
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 8968771..8970023 753..2005 6250 99.9 Plus
2L 23513712 2L 8967569..8968009 16..456 2205 100 Plus
2L 23513712 2L 8968079..8968378 457..756 1500 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:59:18 has no hits.

BO26722.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-16 10:43:06 Download gff for BO26722.complete
Subject Subject Range Query Range Percent Splice Strand
CG18088-RA 34..2022 17..2007 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:15 Download gff for BO26722.complete
Subject Subject Range Query Range Percent Splice Strand
CG18088-RA 36..2024 17..2007 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:40 Download gff for BO26722.complete
Subject Subject Range Query Range Percent Splice Strand
CG18088-RA 36..2024 17..2007 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:40 Download gff for BO26722.complete
Subject Subject Range Query Range Percent Splice Strand
2L 8967570..8968009 17..456 100 -> Plus
2L 8968079..8968376 457..754 100 -> Plus
2L 8968773..8970023 755..2007 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:15 Download gff for BO26722.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 8967570..8968009 17..456 100 -> Plus
arm_2L 8968079..8968376 457..754 100 -> Plus
arm_2L 8968773..8970023 755..2007 99   Plus

BO26722.pep Sequence

Translation from 16 to 2023

> BO26722.pep
MELRICSSYSLYKFLALCCFLTIVLFLIYSSNTSSNTNHDLYPPTTRFSR
VSVKAEPQKFFVKTSKCHIPYVDPFNDEAMELYKPQTLITCSNETDLIST
TYNEIIKRHILHIDDEVAQKLLNFTDKDYNCFYREIKYGKIADTYDNLKA
KKYFTSGYEVPVHVEGMIVECQTADDPIVVLQKDAFAFIQHRPLPKDSIR
PRAARKPSVIMYGIDSLSRINLRRTMPKVFNFLQGPGWYEMQGYNKVADN
SFPNILAILSGYSASTAKENVCDTDKQGCLDEMPMIWKYFKNASYLTGYA
EDESNSNHFNYLKPGFSKKPMDYYFRPLLRALESEMDVYRLPEHDYMRYC
LGRRIANRYIYDYGLQFTKRFVHDRPIWGMFWSNHFSHDDPFMPSAMQEK
VLGDLIDMHADGQFEEMIMIFFADHGTRFGDLTYLKEGFLEERLPMMFIY
LPPWFRETYPSYVRALELNQHRLSSNFDLHNTLKHIIEIGGTPDGRELPK
SFDCPTCQSLFYPLPEGRTCSEAGIEEHWCTCEPYKIISGQDWTTPIAHS
VIDRMNEYFVQKNLTSLCSNLTLNYVHKTEIKTGLNIDWHQTLMESETAV
YRIKFKVKQNSADFQATVVYHNSTQNAQVNVEKISRTNSYKEDSTCIDDK
LAKLYCICFSDLHASFLDH

BO26722.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 14:27:18
Subject Length Description Subject Range Query Range Score Percent Strand
CG18088-PC 663 CG18088-PC 1..663 1..663 3593 100 Plus
CG18088-PB 663 CG18088-PB 1..663 1..663 3593 100 Plus
CG18088-PA 663 CG18088-PA 1..663 1..663 3593 100 Plus
CG9988-PA 668 CG9988-PA 8..665 11..662 1840 51.7 Plus
CG32985-PA 618 CG32985-PA 22..615 60..664 1755 55 Plus