BO26728.complete Sequence
478 bp assembled on 2010-08-18
GenBank Submission: KX795696
> BO26728.complete
GAAGTTATCAGTCGACATGTTCAAGTTGGTGGTATTGTCTGCTCTGCTCG
CTGTAGCCGCTGCCCGTCCCGGTCACCTGTTGGAGTCCTCCCCGCTGGTC
TACGCTGCCCCAGCAGCGACGACCATCGTCCAGGAGCCCGTTCTGGCCAA
GGTGGGAGCCGTGGTCAAGAGCGTACCCACTGCCGTCAGCCACCAGAGCC
AGTCGGTGGTGCACAGTCACGCTCATGTTGTCGAGGATGTCGTTGCTCCC
GTGGTGAAGTCCACTCCGGTGGTCAGCTATGCTGCTGCCGCTCCAGTGGT
TCACACCTCCTATGCCGCTGCTCCCGTTGTCCACACCAGTTACGCTGCTC
CTGCTCCCGTTGTTCACACATCCTACGCCGCCGCCGCTCCCGTTCTGGCC
ACATCCTACGCCCAAGTGGCCGCCTCCTCGCCGCTGACCTACACCGCCAC
TGGTGTGTGGGCAAGCTTTCTAGACCAT
BO26728.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:46:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13043-RA | 447 | CG13043-PA | 1..444 | 17..460 | 2220 | 100 | Plus |
| CG13063-RA | 390 | CG13063-PA | 1..320 | 17..339 | 695 | 81.7 | Plus |
| CG13044-RA | 468 | CG13044-PA | 103..242 | 122..264 | 245 | 79.7 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:46:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13043-RA | 646 | CG13043-RA | 80..523 | 17..460 | 2220 | 100 | Plus |
| CG13063-RA | 544 | CG13063-RA | 46..367 | 15..339 | 705 | 81.8 | Plus |
| CG13044-RA | 624 | CG13044-RA | 168..307 | 122..264 | 245 | 79.7 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:46:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3L | 28110227 | 3L | 16305348..16305791 | 460..17 | 2220 | 100 | Minus |
| 3L | 28110227 | 3L | 16306720..16307028 | 28..339 | 655 | 81.4 | Plus |
| 3L | 28110227 | 3L | 16302807..16302946 | 264..122 | 245 | 79.7 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:46:28 has no hits.
BO26728.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-09-09 16:57:07 Download gff for
BO26728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13043-RA | 81..519 | 22..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:21:34 Download gff for
BO26728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13043-RA | 85..523 | 22..462 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:18:06 Download gff for
BO26728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG13043-RA | 85..523 | 22..462 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:18:06 Download gff for
BO26728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3L | 16305346..16305786 | 22..462 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:21:34 Download gff for
BO26728.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3L | 16298446..16298886 | 22..462 | 99 | | Minus |
BO26728.pep Sequence
Translation from 16 to 478
> BO26728.pep
MFKLVVLSALLAVAAARPGHLLESSPLVYAAPAATTIVQEPVLAKVGAVV
KSVPTAVSHQSQSVVHSHAHVVEDVVAPVVKSTPVVSYAAAAPVVHTSYA
AAPVVHTSYAAPAPVVHTSYAAAAPVLATSYAQVAASSPLTYTATGVWAS
FLDH
BO26728.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:03
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG13043-PA | 148 | CG13043-PA | 1..148 | 1..148 | 725 | 100 | Plus |
| CG13063-PA | 129 | CG13063-PA | 1..127 | 1..130 | 530 | 85.4 | Plus |
| CG13044-PA | 155 | CG13044-PA | 1..155 | 1..148 | 374 | 60.8 | Plus |
| CG13042-PA | 117 | CG13042-PA | 1..102 | 1..103 | 270 | 57.9 | Plus |
| CG13060-PA | 131 | CG13060-PA | 1..128 | 1..143 | 212 | 48.3 | Plus |
