BO26742.complete Sequence
1414 bp assembled on 2010-08-18
GenBank Submission: KX798929
> BO26742.complete
GAAGTTATCAGTCGACATGTCTACGAAACTGGAGCAGCAGCACTCGAAGC
CCATTCTGAGTCCAACTCGATCCCTGGACGAAGGTTTCGAAAGTGATCCG
GATCGGGTTTCCACCGATTCGGAGCATCAGACAAGTGGAACCACTAGCAC
CAGCACTTGCAACAACAGCAATGCAGCAAATACGGTCAGCAACAACAATG
CCAGTAAGCTCGCGCAGCTTAGTTCGGCGGCTACTGGGGGCGCCACTAAG
ACGACGTCCGGAGCAAATGCATCCAGCCCCTCAATGGTGAACTCCGTCAG
GGGCGCACTCACTTTGGCCGCCCCCCAGCTGCAGAGGCGGGAGTTCTTTG
CCAAGGATCAGGGGAAACTAAGGCATCAGGCACCCCCGCAACAGCCACGC
CTCCAGTACCAAAAACAACGACAGCCCCTCGTTCCAAGTGCCGCCTCCAG
TGTCCACAATCACCGGTTGACCGCGTCGATGCAGCAGGGATCTTCGGGAT
TGGGCAATAGTAGCCTGGGAACCGGAACTGGCACTGCTAACTACCGGCGC
GGACGTCGGCTCCACGTGAATCCACCTCGAACCGGCATTAGATCCCATTC
GGTGGACGCCATTTCGCGGCACAATCGCCACGGCTACGATCCAAGTAGCC
TGATCCTGAAGCACGACGGAAATGGCAATATAAGCAGCAGCAATGCCGGT
GCCACCGCCACCCGCATGCTGAACTACAAGTCGCCTGGCGGAGGCACTGC
AGCCGGAGCACCGGCAGCCGGACAGGCCCTACTCGTCCAACCGATTTCTA
GTGCCACCCTATCTCCACTGGTGGCAGCGGGCGTGGTCGATGTGGTCGAG
GGCGGTGGCTCCTCGCCGGTCATCGCCTCGGCCACCCACAGCCTGTATAC
CTTCTATCCGGCGGAGGGGAATCTCCAGGTGTGGCAGACGGAGTGCGGCG
ATCTCACCTACAAGTCCTCCCGAAATATGCATCAACTACACAAGGCACCC
GTGTGCTGGACGCAGTCCATTCCCAGACAGGCCAGAAGATACATAACTCC
GGCAGCAGCCGCCAATGCAACTGCGACCTCATCAACCTCAGCGTCAGGAG
GCGTGGGTGGCACCAACCTGGCGGTTTATCCCACGGCCACCGCCCAGGTT
TATCGCTCGAACAACGGCCTGGATGTTCTGGACTGCGCTGGACTGGAGCA
CCACAACGCGGCCACCACTTCCGGTCACTCAGGCAGCGGCTTCTCCCAGC
GCCTCAGGGAACTGGCCGCCTCCGCCGGACTGCTCTCCCTGAAGCCCCGC
CAGCCTCTCAAGCCGGTGATCAAGACGCGTGGCTCCCCCGGACCGGAGTT
CCCCAAGAAGGTCACCTTTAGTGCCTTTGCCACCGTGCAGGTGGTGGCAA
GCTTTCTAGACCAT
BO26742.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:56:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31176-RA | 1383 | CG31176-PA | 1..1380 | 17..1396 | 6885 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:56:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31176-RA | 2511 | CG31176-RA | 320..1700 | 16..1396 | 6890 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:56:12
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 21718319..21719341 | 1038..16 | 5100 | 99.9 | Minus |
| 3R | 32079331 | 3R | 21673363..21673722 | 1396..1037 | 1800 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:56:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6850..6941 | 121..218 | 125 | 65 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 2327..2399 | 121..198 | 124 | 69.2 | Plus |
| Dvir\TART | 8500 | Dvir\TART TARTVIR 8500bp | 6718..6787 | 129..207 | 123 | 67.1 | Plus |
BO26742.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:52:58 Download gff for
BO26742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31176-RA | 319..1698 | 17..1398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:05 Download gff for
BO26742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31176-RA | 321..1700 | 17..1398 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:46 Download gff for
BO26742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG31176-RA | 321..1700 | 17..1398 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:46 Download gff for
BO26742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 21673360..21673720 | 1039..1398 | 99 | <- | Minus |
| 3R | 21718319..21719340 | 17..1038 | 99 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:05 Download gff for
BO26742.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 17499082..17499442 | 1039..1398 | 99 | <- | Minus |
| arm_3R | 17544041..17545062 | 17..1038 | 99 | | Minus |
BO26742.pep Sequence
Translation from 16 to 1414
> BO26742.pep
MSTKLEQQHSKPILSPTRSLDEGFESDPDRVSTDSEHQTSGTTSTSTCNN
SNAANTVSNNNASKLAQLSSAATGGATKTTSGANASSPSMVNSVRGALTL
AAPQLQRREFFAKDQGKLRHQAPPQQPRLQYQKQRQPLVPSAASSVHNHR
LTASMQQGSSGLGNSSLGTGTGTANYRRGRRLHVNPPRTGIRSHSVDAIS
RHNRHGYDPSSLILKHDGNGNISSSNAGATATRMLNYKSPGGGTAAGAPA
AGQALLVQPISSATLSPLVAAGVVDVVEGGGSSPVIASATHSLYTFYPAE
GNLQVWQTECGDLTYKSSRNMHQLHKAPVCWTQSIPRQARRYITPAAAAN
ATATSSTSASGGVGGTNLAVYPTATAQVYRSNNGLDVLDCAGLEHHNAAT
TSGHSGSGFSQRLRELAASAGLLSLKPRQPLKPVIKTRGSPGPEFPKKVT
FSAFATVQVVASFLDH
BO26742.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:23:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG31176-PA | 460 | CG31176-PA | 1..460 | 1..460 | 2355 | 100 | Plus |
