BO26755.complete Sequence
745 bp assembled on 2010-08-18
GenBank Submission: KX795287
> BO26755.complete
GAAGTTATCAGTCGACATGATGGCACTGCGGAAAACTTTGGTCTTCAACA
GTGCGCTTCTGTTGGTTCTGCTGCTGGCGGAGTCCCAAGCCAAGCCCTCG
CAGGATTTAAACAAACCGCAGACGAAGGAGCCAAGTGATCTGGGTGCAGG
AGCTGGAGCAGCACGAGGAGTGCCGGTGGCTGCCAAAAATAAGACAGCTG
TCGTGGAGGATACTTCCGACGATTCCGACTCAGAGGCGGAATCGGAGGAG
CAGCAGCGGCGGTCATATCCCCACCGCGACGAGGACCAACTGAACTCGGC
CACCAATTTGGTTTTGGCACAGAACTACAAGTACGATGTGGAGATCCTGG
AATCCGGCGATGCCGACCAAGACGACAGTAGCATGGATGACGTGGACGAT
CTGGAGGAGCGTTTCAAGGGACGCGGTGTGATCTTCAGCACGGACACCGA
AACCTTCGCCAACGAGAACATCGAGATGAGCCCGCTGAACGTGCAGGCGG
ATGCGGTTAGCCAGGGACATGTGCTGCTCGGCATCGTGGTGGTGGCACTG
GCCTTGGTCTCCATCGGCCTGTACGCCGGCCTGGTCATATGGCGCTCGCA
CCTGGAGCAGCGGTATGGAATGCGCGAACGACTGGTCAATCACGACTTGG
AGGATGAAGCGGCTGGTGTCGACGACGTCGATTATCAGGTCTATGCGCCA
ACCACGACGGCAGCTACGCCTAGGGCGGCAAGCTTTCTAGACCAT
BO26755.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:56:44
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5835-RA | 714 | CG5835-PA | 1..711 | 17..727 | 3540 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:56:45
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5835-RA | 1344 | CG5835-RA | 225..935 | 17..727 | 3540 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:56:42
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 19149234..19149634 | 607..207 | 1990 | 99.8 | Minus |
| 3R | 32079331 | 3R | 19151488..19151613 | 209..84 | 630 | 100 | Minus |
| 3R | 32079331 | 3R | 19149041..19149161 | 727..607 | 605 | 100 | Minus |
| 3R | 32079331 | 3R | 19153396..19153462 | 83..17 | 335 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:56:43 has no hits.
BO26755.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:05 Download gff for
BO26755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5835-RA | 219..929 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:18 Download gff for
BO26755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5835-RA | 225..935 | 17..729 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:27:57 Download gff for
BO26755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG5835-RA | 225..935 | 17..729 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:27:57 Download gff for
BO26755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 19149039..19149161 | 607..729 | 98 | <- | Minus |
| 3R | 19149235..19149632 | 209..606 | 99 | <- | Minus |
| 3R | 19151489..19151613 | 84..208 | 100 | <- | Minus |
| 3R | 19153396..19153462 | 17..83 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:18 Download gff for
BO26755.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 14974761..14974883 | 607..729 | 98 | <- | Minus |
| arm_3R | 14974957..14975354 | 209..606 | 99 | <- | Minus |
| arm_3R | 14977211..14977335 | 84..208 | 100 | <- | Minus |
| arm_3R | 14979118..14979184 | 17..83 | 100 | | Minus |
BO26755.pep Sequence
Translation from 16 to 745
> BO26755.pep
MMALRKTLVFNSALLLVLLLAESQAKPSQDLNKPQTKEPSDLGAGAGAAR
GVPVAAKNKTAVVEDTSDDSDSEAESEEQQRRSYPHRDEDQLNSATNLVL
AQNYKYDVEILESGDADQDDSSMDDVDDLEERFKGRGVIFSTDTETFANE
NIEMSPLNVQADAVSQGHVLLGIVVVALALVSIGLYAGLVIWRSHLEQRY
GMRERLVNHDLEDEAAGVDDVDYQVYAPTTTAATPRAASFLDH
BO26755.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:08
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG5835-PA | 237 | CG5835-PA | 1..237 | 1..237 | 1186 | 100 | Plus |
