Clone BO26763 Report

Search the DGRC for BO26763

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:267
Well:63
Vector:pDNR-Dual
Associated Gene/TranscriptCG9601-RA
Protein status:BO26763.pep: Imported from assembly
Sequenced Size:1603

Clone Sequence Records

BO26763.complete Sequence

1603 bp assembled on 2010-10-15

GenBank Submission: KX796419

> BO26763.complete
GAAGTTATCAGTCGACATGTCTATGGCTAAATACCTAAACCGATCCGTTG
GAAAAGCTGGCAAGGATGTGGCCGCCAGGATATGCACCCTTAAACCCACT
GAGCCGGAACACCATTCTATACACCTGACCGCTGGGGAGAATTTCGTGGG
ACGCAGCCGGGAGACCGGCATCCGAGATTCCAAGTGCTCGAAGCGACAGA
TTCAACTGCAAGTGGACCTAAAAAAGGCTGTAGTTTCACTTAAAGTCCTG
GGAGTTAATCCCTGCGGCGTCAATGGTCTGATGCTTATGCAGAACGGGGA
ACGCGAGCTGAAGCACGGAGACTTGGTGGAGATCGTTTACGGCAGGCATC
AGTTCGAGGTCGTCTTTAACCCTCCACCGGAGTATGACAAGGAGAAAGCT
GAGCCGTTGTCCACAACACTATCACCGTCAGAGAAATCCGAGAGGTGGGA
CTCATCTGGCAATGGTAAGCTGGTTATCTTTACCAGCGTCGGCGTTAAAG
GTTCTGAAAAGATAGCTGGCTACGACATGGACGGCACCATTATAAAAACA
AAATCGGGACTGGTGTTCCCCAAAAACACCGACGACTGGCAGATCATATT
TCCCGAAGTGCCGGAGAAACTAAAGAATCTCCACAAGGATGGGTTTAAAA
TCTGTCTCTTCACCAACCAAGGAGGCATTGCTCGTGGAAAAATCAACCTA
GATGACTTTAAGGTCAAGATCAAGCATATTGTGGCTAAACTGGGAGTTCC
AATTCAAGTATTTATAGCCATAGGTGATGGATTTTATCGCAAACCTTTGA
CGGGAATGTGGCAGCACTTAAAGAGTGAAATGAATGATGGCGTTGAGATT
CAGGAAGATCGATGTTTCTTCGTCGGCGATGCAGCCGGAAGACCGGAGAC
GGGCAAGGGAGCCACCAAGCGGCGCAAAGATCACTCTTTAGTAGACAGAC
TTTTTGCAGCCAACGTGGGAATTTCATTCTACACTCCAGAGGTTCATTTC
CTGGGCAAACAAGTGGAGCAGTGGAATAAGCCGGACTTTGAACCCACTAG
CGTTCAGGACCAAGTATCTCTGCTTGATCCGGATGACTTGACCCTCGATG
ACCACCCCTGCGAAATGGTCATCATGGTGGGTCTGCCAGGATCCGGAAAG
AGCCACTTTTGTTCCAGCTTTTTTCAACCGCGGGGCTACAAAATCGTCAA
TGCAGATACATTGGGTAGCACTCAAAACTGCCTGACTGCCTGTAAACGGT
TCCTGGACTCGGGCCAATCATGTGTGGTGGATAACACCAATGTGGATGCA
GCTTCTCGAAAAAAATTCTTGCAGTTGGCCAGCGAAAAGATGATTCCATG
CCGCTGCCTTGTGATGAATGTGCCCGTCGCCCAAGTGAAGCACAATATAG
CTTTCCGAGAGCTATCAGACTCCGCGCGCACCAAGATCAAGGACATGGTA
TTTAACATGATGAAGAAAAAGTACCAGGAACCCGCCCTAGACGAAGGATT
TATATCCATACACAAGGTGAACTTTAAGCCCAATTTTGCGGACGAAAAGC
AGGAAAAGCTATACAAAATGTACTTGGTCGAGAAAGCAAGCTTTCTAGAC
CAT

BO26763.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-26 15:02:53
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-RA 1572 CG9601-PA 1..1569 17..1585 7845 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-26 15:02:54
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-RA 1856 CG9601-RA 75..1643 17..1585 7845 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-26 15:02:52
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8341874..8343442 1585..17 7845 100 Minus
Blast to na_te.dros performed on 2014-11-26 15:02:52 has no hits.

BO26763.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-10-15 09:23:02 Download gff for BO26763.complete
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 56..1624 17..1587 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-03 23:28:24 Download gff for BO26763.complete
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 75..1643 17..1587 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-26 16:05:20 Download gff for BO26763.complete
Subject Subject Range Query Range Percent Splice Strand
CG9601-RA 75..1643 17..1587 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-26 16:05:20 Download gff for BO26763.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8341872..8343442 17..1587 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-03 23:28:24 Download gff for BO26763.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4167594..4169164 17..1587 99   Minus

BO26763.pep Sequence

Translation from 16 to 1603

> BO26763.pep
MSMAKYLNRSVGKAGKDVAARICTLKPTEPEHHSIHLTAGENFVGRSRET
GIRDSKCSKRQIQLQVDLKKAVVSLKVLGVNPCGVNGLMLMQNGERELKH
GDLVEIVYGRHQFEVVFNPPPEYDKEKAEPLSTTLSPSEKSERWDSSGNG
KLVIFTSVGVKGSEKIAGYDMDGTIIKTKSGLVFPKNTDDWQIIFPEVPE
KLKNLHKDGFKICLFTNQGGIARGKINLDDFKVKIKHIVAKLGVPIQVFI
AIGDGFYRKPLTGMWQHLKSEMNDGVEIQEDRCFFVGDAAGRPETGKGAT
KRRKDHSLVDRLFAANVGISFYTPEVHFLGKQVEQWNKPDFEPTSVQDQV
SLLDPDDLTLDDHPCEMVIMVGLPGSGKSHFCSSFFQPRGYKIVNADTLG
STQNCLTACKRFLDSGQSCVVDNTNVDAASRKKFLQLASEKMIPCRCLVM
NVPVAQVKHNIAFRELSDSARTKIKDMVFNMMKKKYQEPALDEGFISIHK
VNFKPNFADEKQEKLYKMYLVEKASFLDH

BO26763.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-26 15:11:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG9601-PA 523 CG9601-PA 1..523 1..523 2753 100 Plus