BO26769.complete Sequence
1234 bp assembled on 2010-08-18
GenBank Submission: KX794569
> BO26769.complete
GAAGTTATCAGTCGACATGAGTACCGAAAAGTGGGAGGACAACGAGGAAA
TCAAAATATTCCGCGAATATTTGCGCATAGCTACGGTGCAGCCAAATGTG
GATTACACCGAATGTGTGGAGTTCCTGAAAAGGCAGGCTCACAGCCTGGA
TCTTCCCGTGGATGTTATATATCCAGTGGAGAAGAAGCCTGTGGTGATCA
TCAAGTGGTTGGGCACCGAACCGGAGCTGCCCTCCGTCATTCTCAACTCG
CACATGGATGTGGTGCCGGTGTTCCGTGACAAGTGGACCCACGATCCCTT
CGCTGCCGATATCGATGAGGAGGGCAGGATCTTTGCGCGCGGTACTCAGG
ACATGAAGTCGGTGGGCACAGGATATCTGGGTGCCATCCGCCTGCTTAAG
GCAAGTGGTGTCCAGCCCAAGCGCAATTTCTTCGTGACCTTTGTGCCCGA
TGAGGAGATCGGCGGCGAGCTGGGCATGCAGGAGTTCGTCAAAACGGAAT
ACTACAGCAACATGAATGTTGGTTTCAGTCTGGACGAGGGCGGCACCAGT
GAAATAGATCTGTTCTATGTCTTTTATGCCGAACGTATGCGATGGGGTCT
CAAGCTGAATTTCAGTGGAACCTCTGGACACGGCTCCATGTTGCTGCCCA
GCACTGCCGGCGTGAAACTGAACTATGTGCTCAACAAGCTGACGGAGTTC
CGCGAATCGCAGGTTCAGAGGCTGGCCAATGATCAGACAATCAACATCGG
TGATGTGACAACTATCAATCTCACCCAGCTGAGCGGTGGAGTCCAGAGCA
ATGTGGTGCCTCCTCATTTCGAGGCTGTCTTCGACATGCGTCTGTCCATC
ACCCTGGATGTGGTTGCCTTTGAGAAACAGATCCACGATTGGTGCGAGGA
GGCAGGTGGCGGCATCGAGATCTCCTTCGACGAGAAGGAACCCTACGTGG
CACCCACAAAGATCGACGACTCCAATCCATTCTGGCTGGCTTTCAAGGCT
GCCACCGATGAACTTGGCCTTAAGATCTACCCCATTGTCTGCCCCGGTGC
CACCGACAGCAGGAACATTCGAGCTCAGGGCATTCCAGCCTTGGGATTCT
CACCCATCAAAAATACCACCATGCGCATCCATGATCACGATGAGTTCTTG
GGCGCCGAAACTTATTTGAAGGGCATTCAAATATACAAGAAAATTTTGGG
CAACCTAGCGAATGTCGCAAGCTTTCTAGACCAT
BO26769.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:57:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17109-RB | 1203 | CG17109-PB | 1..1200 | 17..1216 | 5985 | 99.9 | Plus |
CG17109-RA | 1203 | CG17109-PA | 1..1200 | 17..1216 | 5985 | 99.9 | Plus |
CG6733-RA | 1206 | CG6733-PA | 10..1133 | 26..1146 | 1565 | 76.2 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:57:08
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17109-RB | 1373 | CG17109-RB | 44..1243 | 17..1216 | 5985 | 99.9 | Plus |
CG17109-RA | 1313 | CG17109-RA | 44..1243 | 17..1216 | 5985 | 99.9 | Plus |
CG6733-RA | 1291 | CG6733-RA | 26..1164 | 11..1146 | 1580 | 76.1 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:57:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 23095883..23096373 | 108..598 | 2455 | 100 | Plus |
3R | 32079331 | 3R | 23096431..23096849 | 596..1014 | 2095 | 100 | Plus |
3R | 32079331 | 3R | 23096909..23097110 | 1015..1216 | 1010 | 100 | Plus |
3R | 32079331 | 3R | 23097912..23098400 | 113..598 | 640 | 75.9 | Plus |
3R | 32079331 | 3R | 23098460..23098872 | 599..1011 | 625 | 76.8 | Plus |
3R | 32079331 | 3R | 23100283..23100589 | 616..922 | 455 | 76.5 | Plus |
3R | 32079331 | 3R | 23095733..23095823 | 17..107 | 440 | 98.9 | Plus |
3R | 32079331 | 3R | 23099802..23100165 | 188..551 | 425 | 74.5 | Plus |
3R | 32079331 | 3R | 23092066..23092491 | 118..540 | 385 | 73.2 | Plus |
3R | 32079331 | 3R | 23092616..23092919 | 612..915 | 365 | 74.7 | Plus |
3R | 32079331 | 3R | 23091871..23091961 | 17..107 | 245 | 84.6 | Plus |
3R | 32079331 | 3R | 23093909..23094091 | 184..366 | 240 | 75.4 | Plus |
3R | 32079331 | 3R | 23097753..23097841 | 11..99 | 190 | 80.9 | Plus |
3R | 32079331 | 3R | 23099003..23099064 | 1085..1146 | 190 | 87.1 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:57:05 has no hits.
BO26769.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:10 Download gff for
BO26769.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17109-RA | 41..1240 | 17..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:28 Download gff for
BO26769.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17109-RA | 44..1243 | 17..1218 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:03 Download gff for
BO26769.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG17109-RA | 44..1243 | 17..1218 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:03 Download gff for
BO26769.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 23095733..23095823 | 17..107 | 98 | -> | Plus |
3R | 23095883..23096371 | 108..596 | 100 | -> | Plus |
3R | 23096432..23096849 | 597..1014 | 100 | -> | Plus |
3R | 23096909..23097110 | 1015..1218 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:28 Download gff for
BO26769.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 18921455..18921545 | 17..107 | 98 | -> | Plus |
arm_3R | 18921605..18922093 | 108..596 | 100 | -> | Plus |
arm_3R | 18922154..18922571 | 597..1014 | 100 | -> | Plus |
arm_3R | 18922631..18922832 | 1015..1218 | 99 | | Plus |
BO26769.pep Sequence
Translation from 16 to 1234
> BO26769.pep
MSTEKWEDNEEIKIFREYLRIATVQPNVDYTECVEFLKRQAHSLDLPVDV
IYPVEKKPVVIIKWLGTEPELPSVILNSHMDVVPVFRDKWTHDPFAADID
EEGRIFARGTQDMKSVGTGYLGAIRLLKASGVQPKRNFFVTFVPDEEIGG
ELGMQEFVKTEYYSNMNVGFSLDEGGTSEIDLFYVFYAERMRWGLKLNFS
GTSGHGSMLLPSTAGVKLNYVLNKLTEFRESQVQRLANDQTINIGDVTTI
NLTQLSGGVQSNVVPPHFEAVFDMRLSITLDVVAFEKQIHDWCEEAGGGI
EISFDEKEPYVAPTKIDDSNPFWLAFKAATDELGLKIYPIVCPGATDSRN
IRAQGIPALGFSPIKNTTMRIHDHDEFLGAETYLKGIQIYKKILGNLANV
ASFLDH
BO26769.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:25:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG17109-PB | 400 | CG17109-PB | 1..400 | 1..400 | 2097 | 100 | Plus |
CG17109-PA | 400 | CG17109-PA | 1..400 | 1..400 | 2097 | 100 | Plus |
CG6733-PA | 401 | CG6733-PA | 1..401 | 1..400 | 1663 | 77.1 | Plus |
CG6738-PA | 401 | CG6738-PA | 1..401 | 1..400 | 1565 | 72.8 | Plus |
CG6726-PC | 401 | CG6726-PC | 1..400 | 1..399 | 1481 | 68.2 | Plus |