BO26777.complete Sequence
892 bp assembled on 2010-08-18
GenBank Submission: KX798402
> BO26777.complete
GAAGTTATCAGTCGACATGAAGTACCTCAAAGACTGCAGTTTCCATGTCC
TGTTGGTTCTGCTGCTAATGATCCGTGGATCGCTTTGTGTGCCAGCTTTG
GACGCAGCTCCTCCGGCTGCCACACCCAACACCGTGGAAGAGTCGGAAAA
TCTGGTCGAGGGCAGTGGCGAACCAGTTGTCGCACCCACAGACGTGGTAC
CTGCAGCCAGCAATGGTACCACTCCTCCGGCTGAAGGAAACTCGGAAGCA
GCGGTGCCAGACAACGTGGCCAGTGGTAGCAGCATTGATCCCACCACCAT
TTACGCTGGAGGCCTACTCACTCCCGAGGCCTTTCAGCAGTACCTGAGTC
AGTATGGAGCGTATGCTCCTTACTCCTATCCTGCTCCTGTTGCGGGAACA
GCAGCTGGCATTTACCCGTACCCTGGACCCATTGTGGTGCAGACGGGCTA
CGAGGGATTCCTGGTGCCCACTAATACCGCAGGACAATCGGACAGCACCA
CTGTCCTGGCTCCCACTGCCCAGCCCAACTCCTCGAATCCACTGATGACA
TTTGTCTCCAATCTTCTGCCCACGATCCTGATGTCCACGCTCTTTCGCAT
CGCTGCCGTTGTGGTTTCCGCCGTGGGCATCATCCTCTTTGGCGGTGCCA
TCACCAGTGCCCTGTGCAGGATCACTCCAATCTGTGAAATACCCGCCCGT
GCTGTGAATATCCTGCGGACGGGTGGTGCCCAGGATGTGGGTCGCATGCT
GGCCGAGGAGATGACTCCGGAACGAGTGCGTCGGGCAACGGAATTCGTGC
GCAACGCCATCCGGAAGTACAAGCAACTGCAGAAGCTGGTGGAGGCATCG
GAGGCGGTGACCGAGTTGACCAACGCAAGCTTTCTAGACCAT
BO26777.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:57:24
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-RB | 861 | CG10035-PB | 1..858 | 17..874 | 4290 | 100 | Plus |
| CG10035-RA | 861 | CG10035-PA | 1..858 | 17..874 | 4290 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:57:26
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-RB | 1754 | CG10035-RB | 32..889 | 17..874 | 4290 | 100 | Plus |
| CG10035-RA | 972 | CG10035-RA | 32..889 | 17..874 | 4290 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:57:21
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 3R | 32079331 | 3R | 12381734..12382352 | 874..256 | 3095 | 100 | Minus |
| 3R | 32079331 | 3R | 12382421..12382660 | 256..17 | 1200 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 08:57:22
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dyak\TART | 8444 | Dyak\TART TARTYAK 8444bp | 8133..8200 | 871..805 | 112 | 64.7 | Minus |
| TART-C | 11124 | TART-C TARTC 11124bp | 9577..9644 | 871..805 | 112 | 64.7 | Minus |
BO26777.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:14 Download gff for
BO26777.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 31..888 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:34 Download gff for
BO26777.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 31..888 | 17..876 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:06 Download gff for
BO26777.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG10035-RA | 32..889 | 17..876 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:06 Download gff for
BO26777.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 3R | 12381732..12382351 | 257..876 | 99 | <- | Minus |
| 3R | 12382421..12382660 | 17..256 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:34 Download gff for
BO26777.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_3R | 8207454..8208073 | 257..876 | 99 | <- | Minus |
| arm_3R | 8208143..8208382 | 17..256 | 100 | | Minus |
BO26777.pep Sequence
Translation from 16 to 892
> BO26777.pep
MKYLKDCSFHVLLVLLLMIRGSLCVPALDAAPPAATPNTVEESENLVEGS
GEPVVAPTDVVPAASNGTTPPAEGNSEAAVPDNVASGSSIDPTTIYAGGL
LTPEAFQQYLSQYGAYAPYSYPAPVAGTAAGIYPYPGPIVVQTGYEGFLV
PTNTAGQSDSTTVLAPTAQPNSSNPLMTFVSNLLPTILMSTLFRIAAVVV
SAVGIILFGGAITSALCRITPICEIPARAVNILRTGGAQDVGRMLAEEMT
PERVRRATEFVRNAIRKYKQLQKLVEASEAVTELTNASFLDH
BO26777.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:00
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG10035-PB | 286 | CG10035-PB | 1..286 | 1..286 | 1446 | 100 | Plus |
| CG10035-PA | 286 | CG10035-PA | 1..286 | 1..286 | 1446 | 100 | Plus |
