BO26779.complete Sequence
499 bp assembled on 2010-08-18
GenBank Submission: KX798449
> BO26779.complete
GAAGTTATCAGTCGACATGTCTGTGCCTTTCAGTGGCGCATTGCGGCGTT
CCGGCGGCATTGTGTCCGCCATTGGCAAGCAGCTGAAGAGCGTGAATTTG
AAGGGCGTCAAGCGGATAACCGTGCAGTTCGATCCATTCGCGGAAAATGT
CAAGTCCACACGGGAATTCCTCTTCCTGCTCTCCACACCCAAAGTGGCAG
CTACGAATCCCAAGTGCGTGGTCAAGCCAGAAATCGTCTGCGATCGCCAG
CCGGCCAACATCAAGTTTGCCCTGATTGATTCAGCGCAAGAACAAGCCCA
AGTCAAGGAGATCCGCTTCAACAGCGATAACCTAAACACACTAGAGCTGC
TGCAGCTGTGCAACAAGCACGTGTCCAGCTTGGCACCGCGCGAGGAGATC
ACCAACAAGGTCCTGACCAAGGCGGAGAAACAGAAACTAGCAGGAGGCGC
CGGCGGCGGAAAGAAGGCAACCAAGAAGAAGGCAAGCTTTCTAGACCAT
BO26779.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:57:29
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL53-RA | 468 | CG30481-PA | 1..465 | 17..481 | 2325 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:57:31
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG33155-RC | 829 | CG33155-RC | 106..570 | 17..481 | 2325 | 100 | Plus |
| mRpL53-RA | 829 | CG30481-RA | 106..570 | 17..481 | 2325 | 100 | Plus |
| CG33155-RA | 725 | CG33155-RA | 147..466 | 162..481 | 1600 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:57:27
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2R | 25286936 | 2R | 13955213..13955405 | 289..481 | 965 | 100 | Plus |
| 2R | 25286936 | 2R | 13954300..13954446 | 17..163 | 735 | 100 | Plus |
| 2R | 25286936 | 2R | 13954916..13955044 | 162..290 | 645 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:57:28 has no hits.
BO26779.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:15 Download gff for
BO26779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG33155-RC | 102..566 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:36 Download gff for
BO26779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL53-RA | 106..570 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:08 Download gff for
BO26779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| mRpL53-RA | 106..570 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:08 Download gff for
BO26779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2R | 13954300..13954445 | 17..162 | 100 | -> | Plus |
| 2R | 13954917..13955044 | 163..290 | 100 | -> | Plus |
| 2R | 13955215..13955405 | 291..483 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:36 Download gff for
BO26779.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2R | 9841805..9841950 | 17..162 | 100 | -> | Plus |
| arm_2R | 9842422..9842549 | 163..290 | 100 | -> | Plus |
| arm_2R | 9842720..9842910 | 291..483 | 98 | | Plus |
BO26779.pep Sequence
Translation from 16 to 499
> BO26779.pep
MSVPFSGALRRSGGIVSAIGKQLKSVNLKGVKRITVQFDPFAENVKSTRE
FLFLLSTPKVAATNPKCVVKPEIVCDRQPANIKFALIDSAQEQAQVKEIR
FNSDNLNTLELLQLCNKHVSSLAPREEITNKVLTKAEKQKLAGGAGGGKK
ATKKKASFLDH
BO26779.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:07
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| mRpL53-PA | 155 | CG30481-PA | 1..155 | 1..155 | 773 | 100 | Plus |
