BO26784.complete Sequence
499 bp assembled on 2010-08-18
GenBank Submission: KX796104
> BO26784.complete
GAAGTTATCAGTCGACATGGCTGATCAGAACGAGCGCGCCTTCCAAAAAC
AATTCGGTGTCAACCTAAACCGCAAGGTCAAGCCCGGTATCACCAAGAAG
AAGCTGCTGCGTCGCTCCCGCGATGTGGGACTCGGTTTCAAGACCCCACG
TGAGGCCATCGATGGTACCTACATCGACAAGAAGTGCCCCTGGACCGGTG
ATGTGAGGATCCGTGGTCGCATTCTGACCGGCGTGGTCCGCAAGGCCAAG
ATGCAGCGCACCATTGTCATTCGGCGCGACTACCTGCACTTTGTGCGCAA
ATACAGCCGTTTCGAGAAGCGTCACCGCAACATGAGCGTCCACTGCTCCC
CTGTGTTCAGAGATGTTGAGCATGGCGATATTGTCACCATTGGTGAGTGC
CGTCCTCTGTCCAAGACTGTGCGCTTCAACGTCCTGAAAGTCAGCAAGGG
TCAGGGAGCCAAGAAGAGCTTCAAGAAGTACGCAAGCTTTCTAGACCAT
BO26784.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:57:36
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS11-RC | 468 | CG8857-PC | 1..465 | 17..481 | 2325 | 100 | Plus |
RpS11-RB | 465 | CG8857-PB | 133..462 | 152..481 | 1650 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:57:37
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS11-RC | 738 | CG8857-RC | 28..494 | 15..481 | 2335 | 100 | Plus |
RpS11-RB | 569 | CG8857-RB | 162..491 | 152..481 | 1650 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:57:33
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 12199834..12200041 | 360..153 | 1040 | 100 | Minus |
2R | 25286936 | 2R | 12200115..12200244 | 155..26 | 650 | 100 | Minus |
2R | 25286936 | 2R | 12199469..12199592 | 481..358 | 620 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:57:34 has no hits.
BO26784.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:17 Download gff for
BO26784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS11-RA | 43..507 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:37 Download gff for
BO26784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS11-RC | 30..494 | 17..483 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:09 Download gff for
BO26784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
RpS11-RC | 30..494 | 17..483 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:09 Download gff for
BO26784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 12199834..12200039 | 155..360 | 100 | <- | Minus |
2R | 12200116..12200249 | 21..154 | 98 | | Minus |
2R | 12199467..12199589 | 361..483 | 98 | <- | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:37 Download gff for
BO26784.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 8086972..8087094 | 361..483 | 98 | <- | Minus |
arm_2R | 8087339..8087544 | 155..360 | 100 | <- | Minus |
arm_2R | 8087621..8087754 | 21..154 | 98 | | Minus |
BO26784.pep Sequence
Translation from 16 to 499
> BO26784.pep
MADQNERAFQKQFGVNLNRKVKPGITKKKLLRRSRDVGLGFKTPREAIDG
TYIDKKCPWTGDVRIRGRILTGVVRKAKMQRTIVIRRDYLHFVRKYSRFE
KRHRNMSVHCSPVFRDVEHGDIVTIGECRPLSKTVRFNVLKVSKGQGAKK
SFKKYASFLDH
BO26784.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
RpS11-PC | 155 | CG8857-PC | 1..155 | 1..155 | 812 | 100 | Plus |
RpS11-PB | 154 | CG8857-PB | 1..154 | 1..155 | 660 | 83.3 | Plus |