BO26789.complete Sequence
610 bp assembled on 2010-08-18
GenBank Submission: KX798166
> BO26789.complete
GAAGTTATCAGTCGACATGGCCGAGGCTAACAAGAGGAATATCCCCATCA
AGCTGGGCGACTTCAGCGTCATCGACACGGAGTTCAGCAACATCCGCGAG
CGCTTCGACTCCGAGATGCGCAAAATGGAGGAGGAGATGGCCAAGTTCCG
TCACGAGCTGATGAACCGCGAGGCGAACTTCTTCGAGTCCACCAGCTCTA
CTAAAAAAACAACAACTACCAGCTCAACGACAAACTCGGCGCTGCCATCC
CGAATCCCAAAGCAACAGAACTACGTCTCCGACATTAGCTCACCCTTGAT
CCAGGATGAGGGCGATAACAAAGTGCTGAAGCTGCGTTTCGATGTCAGCC
AGTATGCGCCCGAGGAAATTGTTGTGAAAACCGTCGACCAGAAGCTATTG
GTGCACGCCAAGCACGAGGAGAAGTCGGACACAAAGAGCGTGTACAGGGA
GTACAATCGGGAGTTCCTGCTGCCCAAGGGCGTCAATCCCGAGTCCATCC
GCTCGTCCCTCAGCAAGGACGGAGTCCTGACCGTGGACGCCCCCCTGCCA
GCACTCACCGCCGGCGAGACACTGATTCCCATTGCGCACAAGGCAAGCTT
TCTAGACCAT
BO26789.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:57:52
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-RB | 579 | CG14207-PB | 1..576 | 17..592 | 2880 | 100 | Plus |
| CG14207-RD | 552 | CG14207-PD | 175..549 | 218..592 | 1875 | 100 | Plus |
| CG14207-RC | 465 | CG14207-PC | 88..462 | 218..592 | 1875 | 100 | Plus |
| CG14207-RD | 552 | CG14207-PD | 1..182 | 17..198 | 910 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:57:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-RB | 1267 | CG14207-RB | 306..881 | 17..592 | 2880 | 100 | Plus |
| CG14207-RD | 1380 | CG14207-RD | 480..854 | 218..592 | 1875 | 100 | Plus |
| CG14207-RC | 753 | CG14207-RC | 113..487 | 218..592 | 1875 | 100 | Plus |
| CG14207-RD | 1380 | CG14207-RD | 306..487 | 17..198 | 910 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:57:50
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| X | 23542271 | X | 19610695..19610887 | 400..592 | 965 | 100 | Plus |
| X | 23542271 | X | 19605504..19605682 | 17..195 | 895 | 100 | Plus |
| X | 23542271 | X | 19610525..19610625 | 302..402 | 505 | 100 | Plus |
| X | 23542271 | X | 19610378..19610463 | 220..305 | 430 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:57:51 has no hits.
BO26789.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:20 Download gff for
BO26789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RB | 347..922 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:42 Download gff for
BO26789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RB | 306..881 | 17..594 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:15 Download gff for
BO26789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG14207-RB | 306..881 | 17..594 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:15 Download gff for
BO26789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| X | 19610381..19610462 | 223..304 | 100 | -> | Plus |
| X | 19610528..19610623 | 305..400 | 100 | -> | Plus |
| X | 19610696..19610887 | 401..594 | 98 | | Plus |
| X | 19605504..19605682 | 17..195 | 100 | -> | Plus |
| X | 19609463..19609489 | 196..222 | 100 | -> | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:42 Download gff for
BO26789.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_X | 19499537..19499715 | 17..195 | 100 | -> | Plus |
| arm_X | 19503496..19503522 | 196..222 | 100 | -> | Plus |
| arm_X | 19504414..19504495 | 223..304 | 100 | -> | Plus |
| arm_X | 19504561..19504656 | 305..400 | 100 | -> | Plus |
| arm_X | 19504729..19504920 | 401..594 | 98 | | Plus |
BO26789.pep Sequence
Translation from 16 to 610
> BO26789.pep
MAEANKRNIPIKLGDFSVIDTEFSNIRERFDSEMRKMEEEMAKFRHELMN
REANFFESTSSTKKTTTTSSTTNSALPSRIPKQQNYVSDISSPLIQDEGD
NKVLKLRFDVSQYAPEEIVVKTVDQKLLVHAKHEEKSDTKSVYREYNREF
LLPKGVNPESIRSSLSKDGVLTVDAPLPALTAGETLIPIAHKASFLDH
BO26789.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:26:48
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG14207-PB | 192 | CG14207-PB | 1..192 | 1..192 | 965 | 100 | Plus |
| CG14207-PD | 183 | CG14207-PD | 1..183 | 1..192 | 902 | 95.3 | Plus |
| CG14207-PA | 183 | CG14207-PA | 1..183 | 1..192 | 902 | 95.3 | Plus |
| CG14207-PC | 154 | CG14207-PC | 10..154 | 54..192 | 650 | 91.7 | Plus |
| l(2)efl-PC | 187 | CG4533-PC | 75..161 | 100..185 | 194 | 43.7 | Plus |
