Clone BO26792 Report

Search the DGRC for BO26792

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:267
Well:92
Vector:pDNR-Dual
Associated Gene/TranscriptCG11760-RB
Protein status:BO26792.pep: Imported from assembly
Sequenced Size:481

Clone Sequence Records

BO26792.complete Sequence

481 bp assembled on 2010-08-18

GenBank Submission: KX795299

> BO26792.complete
GAAGTTATCAGTCGACATGCCGCCCAAGCGTCCGCCACCGCTCGTGCCGA
AGAAGCCAAATCCCAGCATGAACTACGAGGTGTTGATCTACCTCAACTCG
TTCTACTTTGGCATGTTCGCCTGTTGCGAGATGGCCATGGGCCTCCTGAA
GGCCATCAATCTCAGCTACACGGGACATACTCTAGCCCTGGACACGGGGG
TGATGATTAGCTTCATTGTCTTTGAGACGATCCGATTGATAATGGGGCGC
ATGAGTTCGCTGGCCGATCGAGGCTGGTCGGCCATACTGTCGGTCTTCAT
GACCGCCCCCTGCTTTGTGGGCGTCTCCTATCTACTGCTGCTCCAGACCT
ACCGACTGCGCCTGGAGTACTGCCTGTGCACGCTGCAGATCGCCCTTTAC
CTGACCGAGGTGTGGTATGCCATCGTCTTCGTTTTCTCGCTGTGTCGTCC
AGTAACTTATGATGCAAGCTTTCTAGACCAT

BO26792.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:58:09
Subject Length Description Subject Range Query Range Score Percent Strand
CG11760-RB 450 CG11760-PB 1..447 17..463 2235 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:58:10
Subject Length Description Subject Range Query Range Score Percent Strand
CG11760-RB 1908 CG11760-RB 136..582 17..463 2235 100 Plus
CG8116-RC 1826 CG8116-RC 1289..1481 271..463 965 100 Plus
CG8116-RB 2812 CG8116-RB 1294..1486 271..463 965 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:58:06
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 8719333..8719589 17..273 1285 100 Plus
3R 32079331 3R 8719802..8719994 271..463 965 100 Plus
Blast to na_te.dros performed on 2014-11-28 08:58:07 has no hits.

BO26792.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:24 Download gff for BO26792.complete
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 136..582 17..465 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:49 Download gff for BO26792.complete
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 136..582 17..465 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:22 Download gff for BO26792.complete
Subject Subject Range Query Range Percent Splice Strand
CG11760-RB 136..582 17..465 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:22 Download gff for BO26792.complete
Subject Subject Range Query Range Percent Splice Strand
3R 8719333..8719588 17..272 100 -> Plus
3R 8719804..8719994 273..465 98   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:49 Download gff for BO26792.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 4545055..4545310 17..272 100 -> Plus
arm_3R 4545526..4545716 273..465 98   Plus

BO26792.pep Sequence

Translation from 16 to 481

> BO26792.pep
MPPKRPPPLVPKKPNPSMNYEVLIYLNSFYFGMFACCEMAMGLLKAINLS
YTGHTLALDTGVMISFIVFETIRLIMGRMSSLADRGWSAILSVFMTAPCF
VGVSYLLLLQTYRLRLEYCLCTLQIALYLTEVWYAIVFVFSLCRPVTYDA
SFLDH

BO26792.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:27
Subject Length Description Subject Range Query Range Score Percent Strand
CG11760-PB 149 CG11760-PB 1..149 1..149 786 100 Plus
CG8116-PC 136 CG8116-PC 2..135 15..148 346 48.5 Plus
CG8116-PB 136 CG8116-PB 2..135 15..148 346 48.5 Plus
CG8116-PA 136 CG8116-PA 2..135 15..148 346 48.5 Plus