BO26796.complete Sequence
412 bp assembled on 2010-08-18
GenBank Submission: KX796223
> BO26796.complete
GAAGTTATCAGTCGACATGGCCACCTTAAAGGCCCTCTTCATCTGCGCCT
TTCTTACATGCATTGGTGTTACCTTCCTGATCCTGGCCTGCGCCGTGCCC
ACGACAAAGATTTTCTATCCCTTCTTCGTTTTGCTGTTCTACGTGCTGTC
AGTTCTTCCAGTCTTCATTGCCAGGAGGACAACTCCTGGAAATGAGACCA
ATCCGAAATCGGAGTTTGCTCACTTCCTTACCGCGGGAATGGTGCTGAGT
GCCTTCGCCCTGCCCATCGTCCTAGCCCACGCATTGGTGATCACCTGGAC
GGCGAGTATCCTGACGATAATAAGTAACATTATTAACTACGGCACCATCT
TCTGGTACGCCATGCGCGATGACGAGCCATACGGATCCATGTTCGCAAGC
TTTCTAGACCAT
BO26796.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:58:14
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30423-RE | 381 | CG30423-PE | 1..378 | 17..394 | 1890 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:58:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30423-RE | 655 | CG30423-RE | 86..463 | 17..394 | 1890 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:58:12
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 24875338..24875593 | 289..34 | 1280 | 100 | Minus |
2R | 25286936 | 2R | 24875168..24875273 | 394..289 | 530 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:58:13 has no hits.
BO26796.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:25 Download gff for
BO26796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30423-RC | 57..434 | 17..396 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:51 Download gff for
BO26796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30423-RD | 86..463 | 17..396 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:23 Download gff for
BO26796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG30423-RE | 86..463 | 17..396 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:23 Download gff for
BO26796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 24875166..24875272 | 290..396 | 98 | <- | Minus |
2R | 24875338..24875593 | 33..289 | 99 | <- | Minus |
2R | 24875765..24875780 | 17..32 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:51 Download gff for
BO26796.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 20762689..20762795 | 290..396 | 98 | <- | Minus |
arm_2R | 20762861..20763116 | 33..289 | 99 | <- | Minus |
arm_2R | 20763288..20763303 | 17..32 | 100 | | Minus |
BO26796.pep Sequence
Translation from 16 to 412
> BO26796.pep
MATLKALFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVF
IARRTTPGNETNPKSEFAHFLTAGMVLSAFALPIVLAHALVITWTASILT
IISNIINYGTIFWYAMRDDEPYGSMFASFLDH
BO26796.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:38
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG30423-PE | 126 | CG30423-PE | 1..126 | 1..126 | 651 | 100 | Plus |