Clone BO26796 Report

Search the DGRC for BO26796

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:267
Well:96
Vector:pDNR-Dual
Associated Gene/TranscriptCG30423-RC
Protein status:BO26796.pep: Imported from assembly
Sequenced Size:412

Clone Sequence Records

BO26796.complete Sequence

412 bp assembled on 2010-08-18

GenBank Submission: KX796223

> BO26796.complete
GAAGTTATCAGTCGACATGGCCACCTTAAAGGCCCTCTTCATCTGCGCCT
TTCTTACATGCATTGGTGTTACCTTCCTGATCCTGGCCTGCGCCGTGCCC
ACGACAAAGATTTTCTATCCCTTCTTCGTTTTGCTGTTCTACGTGCTGTC
AGTTCTTCCAGTCTTCATTGCCAGGAGGACAACTCCTGGAAATGAGACCA
ATCCGAAATCGGAGTTTGCTCACTTCCTTACCGCGGGAATGGTGCTGAGT
GCCTTCGCCCTGCCCATCGTCCTAGCCCACGCATTGGTGATCACCTGGAC
GGCGAGTATCCTGACGATAATAAGTAACATTATTAACTACGGCACCATCT
TCTGGTACGCCATGCGCGATGACGAGCCATACGGATCCATGTTCGCAAGC
TTTCTAGACCAT

BO26796.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:58:14
Subject Length Description Subject Range Query Range Score Percent Strand
CG30423-RE 381 CG30423-PE 1..378 17..394 1890 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:58:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG30423-RE 655 CG30423-RE 86..463 17..394 1890 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:58:12
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 24875338..24875593 289..34 1280 100 Minus
2R 25286936 2R 24875168..24875273 394..289 530 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:58:13 has no hits.

BO26796.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:25 Download gff for BO26796.complete
Subject Subject Range Query Range Percent Splice Strand
CG30423-RC 57..434 17..396 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:51 Download gff for BO26796.complete
Subject Subject Range Query Range Percent Splice Strand
CG30423-RD 86..463 17..396 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:23 Download gff for BO26796.complete
Subject Subject Range Query Range Percent Splice Strand
CG30423-RE 86..463 17..396 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:23 Download gff for BO26796.complete
Subject Subject Range Query Range Percent Splice Strand
2R 24875166..24875272 290..396 98 <- Minus
2R 24875338..24875593 33..289 99 <- Minus
2R 24875765..24875780 17..32 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:51 Download gff for BO26796.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 20762689..20762795 290..396 98 <- Minus
arm_2R 20762861..20763116 33..289 99 <- Minus
arm_2R 20763288..20763303 17..32 100   Minus

BO26796.pep Sequence

Translation from 16 to 412

> BO26796.pep
MATLKALFICAFLTCIGVTFLILACAVPTTKIFYPFFVLLFYVLSVLPVF
IARRTTPGNETNPKSEFAHFLTAGMVLSAFALPIVLAHALVITWTASILT
IISNIINYGTIFWYAMRDDEPYGSMFASFLDH

BO26796.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:38
Subject Length Description Subject Range Query Range Score Percent Strand
CG30423-PE 126 CG30423-PE 1..126 1..126 651 100 Plus