BO26820.complete Sequence
496 bp assembled on 2010-08-18
GenBank Submission: KX794574
> BO26820.complete
GAAGTTATCAGTCGACATGAATGTCCTGCTCCGTTGTACGTTCCTGCTGC
TCACCCTGGCCATATGTGGCAGCTGGGCCATTCGATGCTACCAGTGCTCC
TCCGACCAGGATCGCAAGGGACACGACAGCTGTGGCGCCTACAAGAGATT
CAACCGCACCGAGCACATTTCCATTGAGTGCAACAGCGACGAGAGCCACA
TGCCAGGATCCTTCTGCATGAAGGTGGTGCAGCAGGGACCGAGAGGATTC
ATCTGGGACGGTCGTTGGCGCCAGGTGATCCGACGATGTGCATCCGTTTC
CGATACCGGAGTGGTTGGCGTCTGTAACTGGGGAGTCTACGAAAACGGAG
TGTACTGGGAGGAGTGCTACTGCTCCAGCGACAGCTGCAATGGTTCCAGC
TTAGTTCAAATGCACGGATCCCTGCAGCTTCTGTTGGGACTCCTGTTGAT
TGGCGTTGCCTCCAGAATATTTAGAAGTGCAAGCTTTCTAGACCAT
BO26820.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:39:54
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6583-RA | 465 | CG6583-PA | 1..462 | 17..478 | 2310 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:39:55
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6583-RA | 1071 | CG6583-RA | 113..574 | 17..478 | 2310 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:39:51
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 12171701..12171924 | 478..255 | 1120 | 100 | Minus |
| 2L | 23513712 | 2L | 12172116..12172303 | 255..68 | 940 | 100 | Minus |
| 2L | 23513712 | 2L | 12172422..12172474 | 69..17 | 265 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:39:52 has no hits.
BO26820.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:29 Download gff for
BO26820.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6583-RA | 96..557 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:11 Download gff for
BO26820.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6583-RA | 113..574 | 17..480 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:00 Download gff for
BO26820.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG6583-RA | 113..574 | 17..480 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:00 Download gff for
BO26820.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 12171699..12171924 | 255..480 | 99 | <- | Minus |
| 2L | 12172117..12172302 | 69..254 | 100 | <- | Minus |
| 2L | 12172423..12172474 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:11 Download gff for
BO26820.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 12171699..12171924 | 255..480 | 99 | <- | Minus |
| arm_2L | 12172117..12172302 | 69..254 | 100 | <- | Minus |
| arm_2L | 12172423..12172474 | 17..68 | 100 | | Minus |
BO26820.pep Sequence
Translation from 16 to 496
> BO26820.pep
MNVLLRCTFLLLTLAICGSWAIRCYQCSSDQDRKGHDSCGAYKRFNRTEH
ISIECNSDESHMPGSFCMKVVQQGPRGFIWDGRWRQVIRRCASVSDTGVV
GVCNWGVYENGVYWEECYCSSDSCNGSSLVQMHGSLQLLLGLLLIGVASR
IFRSASFLDH
BO26820.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:15:56
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG6583-PA | 154 | CG6583-PA | 1..154 | 1..154 | 850 | 100 | Plus |
