BO26850.complete Sequence
1030 bp assembled on 2010-08-18
GenBank Submission: KX795712
> BO26850.complete
GAAGTTATCAGTCGACATGGTGCAGGCACTGGACTACGATTGCGAGGCAC
AGGGCCAGGACATCCCGCAGGCGATTCAGTTGCTCGGGGAGATGAACAGC
AATGTGAAACAGGTGACTGACTTGGTGGAGGGCATGCTGCAGCGAGTCAA
GCGAGGCGAGCTAACCACAGAGTACGGCCTGAGCTTTCTGGAAGTGAAGT
ACCACATGCTACTGGACTACTTGATCAATCTGACATATGTGGTGCTGCGC
AAATGCTCCGGCGAGACCATTGAGGGTGATCCCTCCATCGAACGTCTGAT
CGAGATTCGCACTGTGCTGGAGAAGATTCGGCCCATAGACCACAAGCTAC
GCTATCAGATTGACAAACTGGTAAAGACAGCCACCACTGGCGTCTCAAGC
AGTACGGATCCCATACTTTACAAACCCAACCCAGATGATATGATGAGCAG
CGCAGGCGGAGCAGGCCGAGATGAGGATGATGGAGAAGATGACAGCGATG
AGGAGGACGAGGACGACGATGAGGAGGATGAGGACGAGGCCGGCGCAGCG
AAAATGCCCCGGAAAGCGGCCACAGCCGGAAAGTCCGGAGTGTACGTGCC
ACCGCGCATCAAGCCCGTTTATTACGATGGCGATGAACGCGATGCCGACA
AGGAGAAAAAGGCACTGGATCGGGCCAAGAAGCGGGCCATTACGTCTTCC
ATGCTGCAGGACCTCAAAGAGGAGTACTTGGATGCTCCTACAGAGATTTC
ATCTGGTTCGCGTGCTCAGCAGATGCTTTCTCAAGCTCAGAAGGAGAAGC
AGGAGTACGAGGAGACCTACTTGATGCGTCTGCCGGTGACCAAGGCGGAG
AAGCATCGCCAGCGAAAACTGACCACCTTGGGCACACTTGGCGATGAAAT
TCTTGGGGAGATCAGTCGGGAATCAGCCCTGCGTGGAGATGGAAGCAAAA
AGCGCAAACTGGCCAAAAAGGGGAAGGGAAAGAAACGTGGCGGTAAAAAG
CGAAAATTCCATGCAAGCTTTCTAGACCAT
BO26850.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:40:15
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11030-RB | 999 | CG11030-PB | 1..996 | 17..1012 | 4980 | 100 | Plus |
| CG11030-RA | 999 | CG11030-PA | 1..996 | 17..1012 | 4980 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:40:17
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11030-RB | 4173 | CG11030-RB | 565..1560 | 17..1012 | 4980 | 100 | Plus |
| CG11030-RA | 1800 | CG11030-RA | 565..1560 | 17..1012 | 4980 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:40:13
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 5758693..5759364 | 24..695 | 3360 | 100 | Plus |
| 2L | 23513712 | 2L | 5759429..5759617 | 694..882 | 945 | 100 | Plus |
| 2L | 23513712 | 2L | 5759676..5759807 | 881..1012 | 660 | 100 | Plus |
Blast to na_te.dros performed 2014-11-28 02:40:14
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| HeT-A | 6083 | HeT-A DM06920 6083bp Derived from U06920.2 (Rel. 67, Last updated, Version 14). | 3788..3921 | 148..21 | 132 | 59.7 | Minus |
| TAHRE | 10463 | TAHRE OSV 10463bp | 7155..7210 | 148..93 | 118 | 67.9 | Minus |
BO26850.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:55:34 Download gff for
BO26850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11030-RA | 563..1558 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:19:18 Download gff for
BO26850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11030-RA | 565..1560 | 17..1014 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:16:04 Download gff for
BO26850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG11030-RA | 565..1560 | 17..1014 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:16:04 Download gff for
BO26850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 5758688..5759362 | 17..693 | 99 | -> | Plus |
| 2L | 5759429..5759616 | 694..881 | 100 | -> | Plus |
| 2L | 5759677..5759807 | 882..1014 | 98 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:19:18 Download gff for
BO26850.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 5759677..5759807 | 882..1014 | 98 | | Plus |
| arm_2L | 5758688..5759362 | 17..693 | 99 | -> | Plus |
| arm_2L | 5759429..5759616 | 694..881 | 100 | -> | Plus |
BO26850.pep Sequence
Translation from 16 to 1030
> BO26850.pep
MVQALDYDCEAQGQDIPQAIQLLGEMNSNVKQVTDLVEGMLQRVKRGELT
TEYGLSFLEVKYHMLLDYLINLTYVVLRKCSGETIEGDPSIERLIEIRTV
LEKIRPIDHKLRYQIDKLVKTATTGVSSSTDPILYKPNPDDMMSSAGGAG
RDEDDGEDDSDEEDEDDDEEDEDEAGAAKMPRKAATAGKSGVYVPPRIKP
VYYDGDERDADKEKKALDRAKKRAITSSMLQDLKEEYLDAPTEISSGSRA
QQMLSQAQKEKQEYEETYLMRLPVTKAEKHRQRKLTTLGTLGDEILGEIS
RESALRGDGSKKRKLAKKGKGKKRGGKKRKFHASFLDH
BO26850.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:17:09
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG11030-PB | 332 | CG11030-PB | 1..332 | 1..332 | 1690 | 100 | Plus |
| CG11030-PA | 332 | CG11030-PA | 1..332 | 1..332 | 1690 | 100 | Plus |
