Clone BO26865 Report

Search the DGRC for BO26865

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:268
Well:65
Vector:pDNR-Dual
Associated Gene/Transcriptl(2)not-RA
Protein status:BO26865.pep: Imported from assembly
Sequenced Size:1564

Clone Sequence Records

BO26865.complete Sequence

1564 bp assembled on 2010-08-18

GenBank Submission: KX794347

> BO26865.complete
GAAGTTATCAGTCGACATGGCCCCGCCAAAGGCCGCCAGCCACCGTCCGG
CGGTGCGGCGCAAGAAGTCGGGCACCCTGGTGGACTCCATCCTGGACAAG
TACCTCAACGTGCGCTTCTTCAAGTATCTGCTCCTGGAGCCGGCCGCTCT
GCCCATAGTTGGCCTCTTCGTGCTCCTGGCGGAGCTGGTCATCAACGTGG
TGGTCATCCAGCGGGTGCCCTACACAGAGATCGACTGGGTGGCTTACATG
CAGGAGTGCGAGGGCTTCCTGAACGGCACCACCAACTACAGTCTGTTGCG
CGGCGACACAGGACCTCTTGTGTATCCAGCCGCCTTCGTGTATATCTACT
CGGCTCTCTACTACGTCACGTCCCACGGAACGAACGTTCGCCTGGCGCAG
TACATCTTCGCCGGGATCTACCTGCTCCAGCTGGCCCTGGTGCTGAGGCT
GTACTCGAAGAGCAGAAAGGTGCCGCCGTATGTGCTAGTGCTCAGTGCCT
TCACGTCGTATCGGATCCACTCGATATACGTGCTGCGACTGTTCAACGAT
CCGGTGGCAGTGCTGCTCCTCTATGCCGCACTCAATTTGTTCCTGGACAG
AAGGTGGACCCTGGGTAGCACCTTCTTCAGCTTGGCGGTGGGCGTTAAGA
TGAACATCCTGCTGTTTGCGCCTGCGCTCTTGCTGTTCTACTTGGCCAAC
CTGGGACTTCTGCGGACGATCCTGCAGCTGGCTGTCTGCGGAGTGATACA
ACTGCTGCTGGGCGCTCCTTTCCTGCTCACCCATCCTGTGGAGTATTTGC
GGGGCAGCTTTGATTTGGGACGCATCTTCGAGCACAAGTGGACGGTCAAC
TATCGCTTCCTGAGCAGAGATCTGTTCGAGAACCGCACCTTCCACGTTTC
GCTTTTGGGCCTGCATCTGCTGCTCCTGCTGGCCTTCGCCAAGCCCACTT
GGACCTTTTTCCAGAGCTACGTGCGCCTGCGCCGTATTGAGGATCAGCTG
CAGCCGCAAATAGCCCAGCAGAACCTCGAGCTGAACGCGCAGAAAAGACC
AAAGAAAGTGGAAAAGGACAAGGACAAGGACCAGAAGAAGTTTACAACCG
AGCAGCAATCCTTCCTGAAGGCCTTCGAGAAGAGCCTGCAGAAGGCGTCT
GGAGGAAAGGCCACTCCGGCACCCGCACAGGCGGAACCGGAACGCTATGG
CATCCACTTCGATCGCTGCACCCAGCTGGCCCTGCTGCCGTTCTTCCTGT
GCAACCTGGTGGGCGTGGCCTGCTCCCGATCCTTGCACTATCAGTTCTAC
GTCTGGTACTTCCACTCGCTACCCTATTTGGCCTGGTCGACGCCGTACTC
GCTGGGCGTGCGCTGCCTGATCCTCGGACTGATTGAGTACTGCTGGAACA
CCTATCCCAGTACGAACTTCTCCAGCGCTGCCCTTCACTTCACCCACATC
ATACTGCTCGCTGGGGTGGCCAAGCAGCTTGTCCAGACCATGCGGATTAA
TAATGCGGCCAAGAGGGAGCAGCAGGAGCAACAGAAAAAGCTGCAGGCAA
GCTTTCTAGACCAT

BO26865.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:58:19
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)not-RA 1533 CG4084-PA 1..1530 17..1546 7620 99.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:58:21
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)not-RA 1704 CG4084-RA 80..1609 17..1546 7620 99.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:58:17
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 23705534..23706778 1546..302 6195 99.8 Minus
2R 25286936 2R 23709427..23709713 303..17 1435 100 Minus
Blast to na_te.dros performed on 2014-11-28 08:58:18 has no hits.

BO26865.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:27 Download gff for BO26865.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)not-RA 1876..3405 17..1548 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:54 Download gff for BO26865.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)not-RA 80..1609 17..1548 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:25 Download gff for BO26865.complete
Subject Subject Range Query Range Percent Splice Strand
l(2)not-RA 80..1609 17..1548 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:25 Download gff for BO26865.complete
Subject Subject Range Query Range Percent Splice Strand
2R 23705532..23706777 303..1548 99 <- Minus
2R 23709428..23709713 17..302 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:54 Download gff for BO26865.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 19593055..19594300 303..1548 99 <- Minus
arm_2R 19596951..19597236 17..302 100   Minus

BO26865.pep Sequence

Translation from 16 to 1564

> BO26865.pep
MAPPKAASHRPAVRRKKSGTLVDSILDKYLNVRFFKYLLLEPAALPIVGL
FVLLAELVINVVVIQRVPYTEIDWVAYMQECEGFLNGTTNYSLLRGDTGP
LVYPAAFVYIYSALYYVTSHGTNVRLAQYIFAGIYLLQLALVLRLYSKSR
KVPPYVLVLSAFTSYRIHSIYVLRLFNDPVAVLLLYAALNLFLDRRWTLG
STFFSLAVGVKMNILLFAPALLLFYLANLGLLRTILQLAVCGVIQLLLGA
PFLLTHPVEYLRGSFDLGRIFEHKWTVNYRFLSRDLFENRTFHVSLLGLH
LLLLLAFAKPTWTFFQSYVRLRRIEDQLQPQIAQQNLELNAQKRPKKVEK
DKDKDQKKFTTEQQSFLKAFEKSLQKASGGKATPAPAQAEPERYGIHFDR
CTQLALLPFFLCNLVGVACSRSLHYQFYVWYFHSLPYLAWSTPYSLGVRC
LILGLIEYCWNTYPSTNFSSAALHFTHIILLAGVAKQLVQTMRINNAAKR
EQQEQQKKLQASFLDH

BO26865.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:50
Subject Length Description Subject Range Query Range Score Percent Strand
l(2)not-PA 510 CG4084-PA 1..510 1..510 2632 100 Plus