BO26865.complete Sequence
1564 bp assembled on 2010-08-18
GenBank Submission: KX794347
> BO26865.complete
GAAGTTATCAGTCGACATGGCCCCGCCAAAGGCCGCCAGCCACCGTCCGG
CGGTGCGGCGCAAGAAGTCGGGCACCCTGGTGGACTCCATCCTGGACAAG
TACCTCAACGTGCGCTTCTTCAAGTATCTGCTCCTGGAGCCGGCCGCTCT
GCCCATAGTTGGCCTCTTCGTGCTCCTGGCGGAGCTGGTCATCAACGTGG
TGGTCATCCAGCGGGTGCCCTACACAGAGATCGACTGGGTGGCTTACATG
CAGGAGTGCGAGGGCTTCCTGAACGGCACCACCAACTACAGTCTGTTGCG
CGGCGACACAGGACCTCTTGTGTATCCAGCCGCCTTCGTGTATATCTACT
CGGCTCTCTACTACGTCACGTCCCACGGAACGAACGTTCGCCTGGCGCAG
TACATCTTCGCCGGGATCTACCTGCTCCAGCTGGCCCTGGTGCTGAGGCT
GTACTCGAAGAGCAGAAAGGTGCCGCCGTATGTGCTAGTGCTCAGTGCCT
TCACGTCGTATCGGATCCACTCGATATACGTGCTGCGACTGTTCAACGAT
CCGGTGGCAGTGCTGCTCCTCTATGCCGCACTCAATTTGTTCCTGGACAG
AAGGTGGACCCTGGGTAGCACCTTCTTCAGCTTGGCGGTGGGCGTTAAGA
TGAACATCCTGCTGTTTGCGCCTGCGCTCTTGCTGTTCTACTTGGCCAAC
CTGGGACTTCTGCGGACGATCCTGCAGCTGGCTGTCTGCGGAGTGATACA
ACTGCTGCTGGGCGCTCCTTTCCTGCTCACCCATCCTGTGGAGTATTTGC
GGGGCAGCTTTGATTTGGGACGCATCTTCGAGCACAAGTGGACGGTCAAC
TATCGCTTCCTGAGCAGAGATCTGTTCGAGAACCGCACCTTCCACGTTTC
GCTTTTGGGCCTGCATCTGCTGCTCCTGCTGGCCTTCGCCAAGCCCACTT
GGACCTTTTTCCAGAGCTACGTGCGCCTGCGCCGTATTGAGGATCAGCTG
CAGCCGCAAATAGCCCAGCAGAACCTCGAGCTGAACGCGCAGAAAAGACC
AAAGAAAGTGGAAAAGGACAAGGACAAGGACCAGAAGAAGTTTACAACCG
AGCAGCAATCCTTCCTGAAGGCCTTCGAGAAGAGCCTGCAGAAGGCGTCT
GGAGGAAAGGCCACTCCGGCACCCGCACAGGCGGAACCGGAACGCTATGG
CATCCACTTCGATCGCTGCACCCAGCTGGCCCTGCTGCCGTTCTTCCTGT
GCAACCTGGTGGGCGTGGCCTGCTCCCGATCCTTGCACTATCAGTTCTAC
GTCTGGTACTTCCACTCGCTACCCTATTTGGCCTGGTCGACGCCGTACTC
GCTGGGCGTGCGCTGCCTGATCCTCGGACTGATTGAGTACTGCTGGAACA
CCTATCCCAGTACGAACTTCTCCAGCGCTGCCCTTCACTTCACCCACATC
ATACTGCTCGCTGGGGTGGCCAAGCAGCTTGTCCAGACCATGCGGATTAA
TAATGCGGCCAAGAGGGAGCAGCAGGAGCAACAGAAAAAGCTGCAGGCAA
GCTTTCTAGACCAT
BO26865.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:58:19
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)not-RA | 1533 | CG4084-PA | 1..1530 | 17..1546 | 7620 | 99.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:58:21
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)not-RA | 1704 | CG4084-RA | 80..1609 | 17..1546 | 7620 | 99.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:58:17
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2R | 25286936 | 2R | 23705534..23706778 | 1546..302 | 6195 | 99.8 | Minus |
2R | 25286936 | 2R | 23709427..23709713 | 303..17 | 1435 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 08:58:18 has no hits.
BO26865.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:27 Download gff for
BO26865.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)not-RA | 1876..3405 | 17..1548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:32:54 Download gff for
BO26865.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)not-RA | 80..1609 | 17..1548 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:25 Download gff for
BO26865.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
l(2)not-RA | 80..1609 | 17..1548 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:25 Download gff for
BO26865.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2R | 23705532..23706777 | 303..1548 | 99 | <- | Minus |
2R | 23709428..23709713 | 17..302 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:32:54 Download gff for
BO26865.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2R | 19593055..19594300 | 303..1548 | 99 | <- | Minus |
arm_2R | 19596951..19597236 | 17..302 | 100 | | Minus |
BO26865.pep Sequence
Translation from 16 to 1564
> BO26865.pep
MAPPKAASHRPAVRRKKSGTLVDSILDKYLNVRFFKYLLLEPAALPIVGL
FVLLAELVINVVVIQRVPYTEIDWVAYMQECEGFLNGTTNYSLLRGDTGP
LVYPAAFVYIYSALYYVTSHGTNVRLAQYIFAGIYLLQLALVLRLYSKSR
KVPPYVLVLSAFTSYRIHSIYVLRLFNDPVAVLLLYAALNLFLDRRWTLG
STFFSLAVGVKMNILLFAPALLLFYLANLGLLRTILQLAVCGVIQLLLGA
PFLLTHPVEYLRGSFDLGRIFEHKWTVNYRFLSRDLFENRTFHVSLLGLH
LLLLLAFAKPTWTFFQSYVRLRRIEDQLQPQIAQQNLELNAQKRPKKVEK
DKDKDQKKFTTEQQSFLKAFEKSLQKASGGKATPAPAQAEPERYGIHFDR
CTQLALLPFFLCNLVGVACSRSLHYQFYVWYFHSLPYLAWSTPYSLGVRC
LILGLIEYCWNTYPSTNFSSAALHFTHIILLAGVAKQLVQTMRINNAAKR
EQQEQQKKLQASFLDH
BO26865.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:27:50
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
l(2)not-PA | 510 | CG4084-PA | 1..510 | 1..510 | 2632 | 100 | Plus |