BO26894.complete Sequence
1579 bp assembled on 2010-08-18
GenBank Submission: KX795695
> BO26894.complete
GAAGTTATCAGTCGACATGGATCGTCTGCGTCGCTCCTTTCGCGATTCCT
TTAGGCGTCGCAAGGATCGCGTTCCCGAATCCTCGAAGCCGCATCAATGG
CAGGCGGACGAGGAGGCCGTGCGATCGGCCACCTGCTCCTTTTCCGTCAA
GTATCTGGGATGTGTCGAGGTCTTTGAATCGCGCGGCATGCAGGTCTGCG
AGGAGGCACTCAAGGTCTTGAGGCAATCCCGTCGTCGTCCTGTCCGCGGA
TTACTTCATGTCAGCGGAGACGGCCTGCGAGTGGTGGACGACGAGACCAA
GGGCCTGATAGTGGACCAGACCATCGAGAAGGTCAGCTTCTGTGCACCGG
ATCGCAATCACGAACGCGGCTTCAGCTACATATGCCGGGATGGAACCACT
CGTCGCTGGATGTGTCACGGCTTCCTGGCGTGCAAGGACTCCGGCGAGCG
ATTGTCCCATGCCGTTGGCTGTGCTTTTGCCGTTTGTCTGGAGCGAAAGC
AGCGACGCGACAAGGAGTGCGGCGTGACAATGACCTTCGACACGAAGAAC
TCGACCTTCACGCGGACCGGATCCTTCCGTCAGCAGACGTTGACGGAGCG
TCTGGCAATGGCCACAGTGGGCACAAATGAGCGGAGCGTAGATGGGCCGG
GATCAGCAATGCCGGGTCCTCCGGCGGCCACCGTCAAGCCTTTCAATCCC
TTCGCCATCGAACGGCCCCATGCCACGCCCAACATGCTGGAGCGTCAGAG
TTCGTTCCGTTTGAGCACGATTGGCAGTCAGTCGCCGTTCAAGCGCCAGA
TGTCACTGCGCATCAACGATCTTCCGTCCAATGCCGATCGTCAGAGGGCC
TTCCTGACCGCCGCCGCTGGCAATCCAATGCAGACGCCACTGCGAAGTGT
TTCTCCCATTGCCGAGGTCTCGCCGGCCAAGTCTGCTGGAGCGGATCCGT
TGTCAGCTGCCGCTGTAGCCGCCGATTCTGTGAGCCAACTGTGTCAGGAG
CTCAGCCAGGGTCTCTCGCTCTTGACCCAGACAGACGCCCTATTAGCCGC
CGGCGAGGATCTAAACTTCAACAACAATCGCAGCATTAATCAGAACATCA
TTGCCGCCGAGAAGCAGGTGCAACATGTACACTCATATGCCCCGCCGACG
GCACAAGTGACGCCTCGAGTGGCCAGCACCACGCCCACATATCAGACGCT
CCATTCGCAGTCGCCCTCGCGATCGGAGCAGAGCATCGAAACCTCGACGG
AACTGCCCAATGCCGAGCAATGGCTGGGTCATGTGGTGCGCAGTACGTCT
CCGGCAGCACCGAAGCGGCCCACTTATTTGGCCAACGTTGGCCGAGCTCA
GACACTGGCCAGTGGCACTGGCGCTGCAGTTGGAGGCGGTGGCCCAGACG
ATCCATTTGACGCCGAGTGGGTGGCCAATGTGGCAGCGGCCAAGCAATTG
TCGCCAGACTTGCCAATCCCGAGCACTGCGCGCTCGCCTCTGGCCAGGCA
CAGCACCAATCCGTTCATCTCACCGCCCAAGGCGCCGGCGCAGTCATTCC
AGGTGCAGCTCGCAAGCTTTCTAGACCAT
BO26894.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 08:58:37
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 1671 | CG3779-PD | 124..1668 | 17..1561 | 7725 | 100 | Plus |
| numb-RB | 1548 | CG3779-PB | 1..1545 | 17..1561 | 7725 | 100 | Plus |
| numb-RA | 1671 | CG3779-PA | 124..1668 | 17..1561 | 7725 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 08:58:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-RD | 4395 | CG3779-RD | 942..2486 | 17..1561 | 7725 | 100 | Plus |
| numb-RB | 2956 | CG3779-RB | 564..2108 | 17..1561 | 7725 | 100 | Plus |
| numb-RA | 3309 | CG3779-RA | 917..2461 | 17..1561 | 7725 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 08:58:35
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 9460937..9462275 | 223..1561 | 6695 | 100 | Plus |
| 2L | 23513712 | 2L | 9460547..9460753 | 17..223 | 1035 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 08:58:36 has no hits.
BO26894.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-08-18 15:53:31 Download gff for
BO26894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RB | 520..2064 | 17..1563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 22:33:01 Download gff for
BO26894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 917..2461 | 17..1563 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 09:28:31 Download gff for
BO26894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| numb-RA | 917..2461 | 17..1563 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 09:28:31 Download gff for
BO26894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 9460547..9460753 | 17..223 | 100 | -> | Plus |
| 2L | 9460938..9462275 | 224..1563 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 22:33:01 Download gff for
BO26894.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 9460547..9460753 | 17..223 | 100 | -> | Plus |
| arm_2L | 9460938..9462275 | 224..1563 | 99 | | Plus |
BO26894.pep Sequence
Translation from 16 to 1579
> BO26894.pep
MDRLRRSFRDSFRRRKDRVPESSKPHQWQADEEAVRSATCSFSVKYLGCV
EVFESRGMQVCEEALKVLRQSRRRPVRGLLHVSGDGLRVVDDETKGLIVD
QTIEKVSFCAPDRNHERGFSYICRDGTTRRWMCHGFLACKDSGERLSHAV
GCAFAVCLERKQRRDKECGVTMTFDTKNSTFTRTGSFRQQTLTERLAMAT
VGTNERSVDGPGSAMPGPPAATVKPFNPFAIERPHATPNMLERQSSFRLS
TIGSQSPFKRQMSLRINDLPSNADRQRAFLTAAAGNPMQTPLRSVSPIAE
VSPAKSAGADPLSAAAVAADSVSQLCQELSQGLSLLTQTDALLAAGEDLN
FNNNRSINQNIIAAEKQVQHVHSYAPPTAQVTPRVASTTPTYQTLHSQSP
SRSEQSIETSTELPNAEQWLGHVVRSTSPAAPKRPTYLANVGRAQTLASG
TGAAVGGGGPDDPFDAEWVANVAAAKQLSPDLPIPSTARSPLARHSTNPF
ISPPKAPAQSFQVQLASFLDH
BO26894.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 06:28:38
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| numb-PD | 556 | CG3779-PD | 42..556 | 1..515 | 2663 | 100 | Plus |
| numb-PB | 515 | CG3779-PB | 1..515 | 1..515 | 2663 | 100 | Plus |
| numb-PA | 556 | CG3779-PA | 42..556 | 1..515 | 2663 | 100 | Plus |
