Clone BO26903 Report

Search the DGRC for BO26903

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:3
Vector:pDNR-Dual
Associated Gene/TranscriptCG6873-RA
Protein status:BO26903.pep: Imported from assembly
Sequenced Size:478

Clone Sequence Records

BO26903.complete Sequence

478 bp assembled on 2010-07-02

GenBank Submission: KX798522

> BO26903.complete
GAAGTTATCAGTCGACATGGCATCTGGAATTAATTTGAGCCGCGAGTGTC
AGCACGTGTTCGAGCAGATCCGGAAGCTGAAGCAACATCGCTACGCGGTC
TTCGTCATCCAGGACGAGCGGGAGATTAAGGTGGAGGTGCTTGGAGTAAG
GGAGGCGAACTACGACGACTTCCTGGCGGATCTGCAACGTGCCGGATCCA
ATCAGTGCCGATTCGCTGTCTACGACTATGAGTATCAGCACCAGTGCCAG
GGCACCTTGTCCACCTGCCTGAAGGAGAAGCTAATCCTGATGCTCTGGTG
TCCCACTCTGGCCAGGATCAAGGACAAGATGCTCTACTCCAGCACGTTTG
CGGTGCTCAAGCGAGAGTTTCCCGGCGTCCAGAAGTGCATTCAGGCCACC
GAACCGGAGGAGGCGTGCCGCAATGCTGTCGAGGAGCAGCTGCGCTCCTT
GGACAGGGAGGCAAGCTTTCTAGACCAT

BO26903.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6873-RA 447 CG6873-PA 1..444 17..460 2220 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:12:44
Subject Length Description Subject Range Query Range Score Percent Strand
CG6873-RA 680 CG6873-RA 171..615 16..460 2225 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:12:42
Subject Length Description Subject Range Query Range Score Percent Strand
X 23542271 X 18739281..18739725 460..16 2225 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:12:43 has no hits.

BO26903.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:49 Download gff for BO26903.complete
Subject Subject Range Query Range Percent Splice Strand
CG6873-RA 1..444 17..462 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:44 Download gff for BO26903.complete
Subject Subject Range Query Range Percent Splice Strand
CG6873-RA 172..615 17..462 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:15 Download gff for BO26903.complete
Subject Subject Range Query Range Percent Splice Strand
CG6873-RA 172..615 17..462 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:15 Download gff for BO26903.complete
Subject Subject Range Query Range Percent Splice Strand
X 18739279..18739724 17..462 99   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:44 Download gff for BO26903.complete
Subject Subject Range Query Range Percent Splice Strand
arm_X 18633312..18633757 17..462 99   Minus

BO26903.pep Sequence

Translation from 16 to 478

> BO26903.pep
MASGINLSRECQHVFEQIRKLKQHRYAVFVIQDEREIKVEVLGVREANYD
DFLADLQRAGSNQCRFAVYDYEYQHQCQGTLSTCLKEKLILMLWCPTLAR
IKDKMLYSSTFAVLKREFPGVQKCIQATEPEEACRNAVEEQLRSLDREAS
FLDH

BO26903.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:52
Subject Length Description Subject Range Query Range Score Percent Strand
CG6873-PA 148 CG6873-PA 1..148 1..148 773 100 Plus
tsr-PA 148 CG4254-PA 1..148 1..148 434 52.7 Plus