BO26907.complete Sequence
400 bp assembled on 2010-07-02
GenBank Submission: KX797900
> BO26907.complete
GAAGTTATCAGTCGACATGGCAGATACCCGTAAAGACGCCGCGCCGCCGA
GCTACGAAGAAGTCATGAACAGTCCCTCGCAGGATTCCCGGCTGATAGTG
GGCGTGCATCAGGGAGCACCTAGTGCTCCGCCACCAAACATGCACATGCC
AACCTACGGAGCTTTCGAGACGACGCCGGTCAGCGTGGTGATTCAGCCTG
CTCCGGTCGCTATGCCCACCGAGATCATCGTGATTGGAGGATGCCCTGCA
TGTCGGATTGGATACCTGGAGGACACCTTCTCCGCCTGCGGACTGTGCTG
CGCAATCTTCTTCTTCCCGCTGGGAATTCTCTGTTGCTTGGCCATGCGTG
AGAAGCGCTGTTCCAACTGCGGAACGGTTTTCGCAAGCTTTCTAGACCAT
BO26907.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:12:15
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12012-RC | 369 | CG12012-PC | 1..366 | 17..382 | 1830 | 100 | Plus |
CG12012-RA | 369 | CG12012-PA | 1..366 | 17..382 | 1830 | 100 | Plus |
CG12012-RB | 246 | CG12012-PB | 1..243 | 140..382 | 1215 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:12:16
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12012-RC | 1185 | CG12012-RC | 125..490 | 17..382 | 1830 | 100 | Plus |
CG12012-RA | 880 | CG12012-RA | 125..490 | 17..382 | 1830 | 100 | Plus |
CG12012-RB | 931 | CG12012-RB | 242..541 | 83..382 | 1500 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:12:13
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3L | 28110227 | 3L | 3376998..3377297 | 83..382 | 1500 | 100 | Plus |
3L | 28110227 | 3L | 3376881..3376947 | 17..83 | 335 | 100 | Plus |
Blast to na_te.dros performed on 2014-11-28 02:12:14 has no hits.
BO26907.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:46 Download gff for
BO26907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12012-RA | 1..366 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:32 Download gff for
BO26907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12012-RA | 125..490 | 17..384 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:06 Download gff for
BO26907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG12012-RA | 125..490 | 17..384 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:06 Download gff for
BO26907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3L | 3376881..3376947 | 17..83 | 100 | -> | Plus |
3L | 3376999..3377297 | 84..384 | 99 | | Plus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:32 Download gff for
BO26907.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3L | 3376881..3376947 | 17..83 | 100 | -> | Plus |
arm_3L | 3376999..3377297 | 84..384 | 99 | | Plus |
BO26907.pep Sequence
Translation from 16 to 400
> BO26907.pep
MADTRKDAAPPSYEEVMNSPSQDSRLIVGVHQGAPSAPPPNMHMPTYGAF
ETTPVSVVIQPAPVAMPTEIIVIGGCPACRIGYLEDTFSACGLCCAIFFF
PLGILCCLAMREKRCSNCGTVFASFLDH
BO26907.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:47
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG12012-PC | 122 | CG12012-PC | 1..122 | 1..122 | 665 | 100 | Plus |
CG12012-PA | 122 | CG12012-PA | 1..122 | 1..122 | 665 | 100 | Plus |
CG12012-PB | 81 | CG12012-PB | 1..81 | 42..122 | 449 | 100 | Plus |