Clone BO26907 Report

Search the DGRC for BO26907

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:7
Vector:pDNR-Dual
Associated Gene/TranscriptCG12012-RA
Protein status:BO26907.pep: Imported from assembly
Sequenced Size:400

Clone Sequence Records

BO26907.complete Sequence

400 bp assembled on 2010-07-02

GenBank Submission: KX797900

> BO26907.complete
GAAGTTATCAGTCGACATGGCAGATACCCGTAAAGACGCCGCGCCGCCGA
GCTACGAAGAAGTCATGAACAGTCCCTCGCAGGATTCCCGGCTGATAGTG
GGCGTGCATCAGGGAGCACCTAGTGCTCCGCCACCAAACATGCACATGCC
AACCTACGGAGCTTTCGAGACGACGCCGGTCAGCGTGGTGATTCAGCCTG
CTCCGGTCGCTATGCCCACCGAGATCATCGTGATTGGAGGATGCCCTGCA
TGTCGGATTGGATACCTGGAGGACACCTTCTCCGCCTGCGGACTGTGCTG
CGCAATCTTCTTCTTCCCGCTGGGAATTCTCTGTTGCTTGGCCATGCGTG
AGAAGCGCTGTTCCAACTGCGGAACGGTTTTCGCAAGCTTTCTAGACCAT

BO26907.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:12:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG12012-RC 369 CG12012-PC 1..366 17..382 1830 100 Plus
CG12012-RA 369 CG12012-PA 1..366 17..382 1830 100 Plus
CG12012-RB 246 CG12012-PB 1..243 140..382 1215 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:12:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG12012-RC 1185 CG12012-RC 125..490 17..382 1830 100 Plus
CG12012-RA 880 CG12012-RA 125..490 17..382 1830 100 Plus
CG12012-RB 931 CG12012-RB 242..541 83..382 1500 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:12:13
Subject Length Description Subject Range Query Range Score Percent Strand
3L 28110227 3L 3376998..3377297 83..382 1500 100 Plus
3L 28110227 3L 3376881..3376947 17..83 335 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:12:14 has no hits.

BO26907.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:46 Download gff for BO26907.complete
Subject Subject Range Query Range Percent Splice Strand
CG12012-RA 1..366 17..384 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:32 Download gff for BO26907.complete
Subject Subject Range Query Range Percent Splice Strand
CG12012-RA 125..490 17..384 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:06 Download gff for BO26907.complete
Subject Subject Range Query Range Percent Splice Strand
CG12012-RA 125..490 17..384 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:06 Download gff for BO26907.complete
Subject Subject Range Query Range Percent Splice Strand
3L 3376881..3376947 17..83 100 -> Plus
3L 3376999..3377297 84..384 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:32 Download gff for BO26907.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3L 3376881..3376947 17..83 100 -> Plus
arm_3L 3376999..3377297 84..384 99   Plus

BO26907.pep Sequence

Translation from 16 to 400

> BO26907.pep
MADTRKDAAPPSYEEVMNSPSQDSRLIVGVHQGAPSAPPPNMHMPTYGAF
ETTPVSVVIQPAPVAMPTEIIVIGGCPACRIGYLEDTFSACGLCCAIFFF
PLGILCCLAMREKRCSNCGTVFASFLDH

BO26907.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:47
Subject Length Description Subject Range Query Range Score Percent Strand
CG12012-PC 122 CG12012-PC 1..122 1..122 665 100 Plus
CG12012-PA 122 CG12012-PA 1..122 1..122 665 100 Plus
CG12012-PB 81 CG12012-PB 1..81 42..122 449 100 Plus