Clone BO26908 Report

Search the DGRC for BO26908

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:8
Vector:pDNR-Dual
Associated Gene/TranscriptCG14871-RB
Protein status:BO26908.pep: Imported from assembly
Sequenced Size:358

Clone Sequence Records

BO26908.complete Sequence

358 bp assembled on 2010-07-02

GenBank Submission: KX798760

> BO26908.complete
GAAGTTATCAGTCGACATGACTAAGACAACGATGCATTGGCTGGCTCACT
TCCAGATCATCTTGCTATGCATTTGGTTGATGTGCCCCCCCAGTTCGCAG
GCCATAAAATGCGACACTTGTGGCAAGGAGTGTGCCAGCGCATGTGGCAC
AAAGCACTTTCGCACATGCTGCTTTAACTACCTTCGCAAGCGATCCGACC
CCGATGCACTGCGTCAGAGCTCGAACAGGAGGCTCATCGACTTCATACTG
CTGCAGGGGCGTGCCCTCTTCACCCAGGAGTTGCGAGAAAGGCGCCACAA
TGGCACATTGATGGACCTCGGCCTGAACACCTACTACCCCGCAAGCTTTC
TAGACCAT

BO26908.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:12:06
Subject Length Description Subject Range Query Range Score Percent Strand
Trissin-RB 327 CG14871-PB 1..324 17..340 1620 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:12:07
Subject Length Description Subject Range Query Range Score Percent Strand
Trissin-RB 551 CG14871-RB 61..384 17..340 1620 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:12:04
Subject Length Description Subject Range Query Range Score Percent Strand
3R 32079331 3R 15484897..15485075 340..162 895 100 Minus
3R 32079331 3R 15485129..15485222 162..69 470 100 Minus
3R 32079331 3R 15485284..15485336 69..17 265 100 Minus
Blast to na_te.dros performed 2014-11-28 02:12:05
Subject Length Description Subject Range Query Range Score Percent Strand
invader6 4885 invader6 INVADER6 4885bp 726..757 257..226 106 81.2 Minus

BO26908.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:45 Download gff for BO26908.complete
Subject Subject Range Query Range Percent Splice Strand
CG14871-RB 61..384 17..342 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:28 Download gff for BO26908.complete
Subject Subject Range Query Range Percent Splice Strand
Trissin-RB 61..384 17..342 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:02 Download gff for BO26908.complete
Subject Subject Range Query Range Percent Splice Strand
Trissin-RB 61..384 17..342 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:02 Download gff for BO26908.complete
Subject Subject Range Query Range Percent Splice Strand
3R 15484895..15485074 163..342 98 <- Minus
3R 15485129..15485222 69..162 100 <- Minus
3R 15485285..15485336 17..68 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:28 Download gff for BO26908.complete
Subject Subject Range Query Range Percent Splice Strand
arm_3R 11310617..11310796 163..342 98 <- Minus
arm_3R 11310851..11310944 69..162 100 <- Minus
arm_3R 11311007..11311058 17..68 100   Minus

BO26908.pep Sequence

Translation from 16 to 358

> BO26908.pep
MTKTTMHWLAHFQIILLCIWLMCPPSSQAIKCDTCGKECASACGTKHFRT
CCFNYLRKRSDPDALRQSSNRRLIDFILLQGRALFTQELRERRHNGTLMD
LGLNTYYPASFLDH

BO26908.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:46
Subject Length Description Subject Range Query Range Score Percent Strand
Trissin-PB 108 CG14871-PB 1..108 1..108 597 100 Plus