BO26908.complete Sequence
358 bp assembled on 2010-07-02
GenBank Submission: KX798760
> BO26908.complete
GAAGTTATCAGTCGACATGACTAAGACAACGATGCATTGGCTGGCTCACT
TCCAGATCATCTTGCTATGCATTTGGTTGATGTGCCCCCCCAGTTCGCAG
GCCATAAAATGCGACACTTGTGGCAAGGAGTGTGCCAGCGCATGTGGCAC
AAAGCACTTTCGCACATGCTGCTTTAACTACCTTCGCAAGCGATCCGACC
CCGATGCACTGCGTCAGAGCTCGAACAGGAGGCTCATCGACTTCATACTG
CTGCAGGGGCGTGCCCTCTTCACCCAGGAGTTGCGAGAAAGGCGCCACAA
TGGCACATTGATGGACCTCGGCCTGAACACCTACTACCCCGCAAGCTTTC
TAGACCAT
BO26908.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:12:06
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trissin-RB | 327 | CG14871-PB | 1..324 | 17..340 | 1620 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:12:07
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trissin-RB | 551 | CG14871-RB | 61..384 | 17..340 | 1620 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:12:04
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
3R | 32079331 | 3R | 15484897..15485075 | 340..162 | 895 | 100 | Minus |
3R | 32079331 | 3R | 15485129..15485222 | 162..69 | 470 | 100 | Minus |
3R | 32079331 | 3R | 15485284..15485336 | 69..17 | 265 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:12:05
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
invader6 | 4885 | invader6 INVADER6 4885bp | 726..757 | 257..226 | 106 | 81.2 | Minus |
BO26908.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:45 Download gff for
BO26908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG14871-RB | 61..384 | 17..342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:28 Download gff for
BO26908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trissin-RB | 61..384 | 17..342 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:02 Download gff for
BO26908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
Trissin-RB | 61..384 | 17..342 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:02 Download gff for
BO26908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
3R | 15484895..15485074 | 163..342 | 98 | <- | Minus |
3R | 15485129..15485222 | 69..162 | 100 | <- | Minus |
3R | 15485285..15485336 | 17..68 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:28 Download gff for
BO26908.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_3R | 11310617..11310796 | 163..342 | 98 | <- | Minus |
arm_3R | 11310851..11310944 | 69..162 | 100 | <- | Minus |
arm_3R | 11311007..11311058 | 17..68 | 100 | | Minus |
BO26908.pep Sequence
Translation from 16 to 358
> BO26908.pep
MTKTTMHWLAHFQIILLCIWLMCPPSSQAIKCDTCGKECASACGTKHFRT
CCFNYLRKRSDPDALRQSSNRRLIDFILLQGRALFTQELRERRHNGTLMD
LGLNTYYPASFLDH
BO26908.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:46
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
Trissin-PB | 108 | CG14871-PB | 1..108 | 1..108 | 597 | 100 | Plus |