Clone BO26911 Report

Search the DGRC for BO26911

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:11
Vector:pDNR-Dual
Associated Gene/TranscriptCG17261-RA
Protein status:BO26911.pep: Imported from assembly
Sequenced Size:448

Clone Sequence Records

BO26911.complete Sequence

448 bp assembled on 2010-07-02

GenBank Submission: KX798351

> BO26911.complete
GAAGTTATCAGTCGACATGGATAAACATAAACCTACGTTGCTGCCGTATA
TTATGGACATGCTAAGTCGCGAGACGCAAATGTGCTCTTCTGTGGACGAC
GTGGTTAAACACATCAAGGACGTTATGCTCGAGGAGCACGTCAGAGCCTT
CGGGAGCCTCAAGCGTGCGGTGGAGTTTGCCCTGGAGTTGGGCGTCAACA
TGGGCATCCTCTCGATGACCAAGACGGTCCGCATGCCCATCAGGTACCGC
AGAAGTAAATCCAAGACTAAGGTGCCTGTCAGGAACAGGATCCCTCTCCG
CTTGGGACGCCAGCTGACCAAGCAGCGGATGGCGACGACCACGGCAACCA
AGTTGGCGGCCAAGAAGCGGTCAGGCGGACGCCTAAAAAAGCCCAAGAAG
ACTCCTGGGGCAGCGCCAAAGAAGCAAAACGCAAGCTTTCTAGACCAT

BO26911.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:13:15
Subject Length Description Subject Range Query Range Score Percent Strand
CG17261-RB 417 CG17261-PB 1..414 17..430 2070 100 Plus
CG17261-RA 417 CG17261-PA 1..414 17..430 2070 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:16
Subject Length Description Subject Range Query Range Score Percent Strand
CG17261-RB 869 CG17261-RB 390..803 17..430 2070 100 Plus
CG17261-RA 598 CG17261-RA 119..532 17..430 2070 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:13:14
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 3043181..3043527 84..430 1735 100 Plus
2L 23513712 2L 3043037..3043104 17..84 340 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:13:14 has no hits.

BO26911.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:52 Download gff for BO26911.complete
Subject Subject Range Query Range Percent Splice Strand
CG17261-RA 122..535 17..432 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:57 Download gff for BO26911.complete
Subject Subject Range Query Range Percent Splice Strand
CG17261-RA 119..532 17..432 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:28 Download gff for BO26911.complete
Subject Subject Range Query Range Percent Splice Strand
CG17261-RA 119..532 17..432 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:28 Download gff for BO26911.complete
Subject Subject Range Query Range Percent Splice Strand
2L 3043037..3043103 17..83 100 -> Plus
2L 3043181..3043527 84..432 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:57 Download gff for BO26911.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 3043037..3043103 17..83 100 -> Plus
arm_2L 3043181..3043527 84..432 99   Plus

BO26911.pep Sequence

Translation from 16 to 448

> BO26911.pep
MDKHKPTLLPYIMDMLSRETQMCSSVDDVVKHIKDVMLEEHVRAFGSLKR
AVEFALELGVNMGILSMTKTVRMPIRYRRSKSKTKVPVRNRIPLRLGRQL
TKQRMATTTATKLAAKKRSGGRLKKPKKTPGAAPKKQNASFLDH

BO26911.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:27:48
Subject Length Description Subject Range Query Range Score Percent Strand
CG17261-PB 138 CG17261-PB 1..138 1..138 695 100 Plus
CG17261-PA 138 CG17261-PA 1..138 1..138 695 100 Plus