Clone BO26912 Report

Search the DGRC for BO26912

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:12
Vector:pDNR-Dual
Associated Gene/TranscriptCG30075-RA
Protein status:BO26912.pep: Imported from assembly
Sequenced Size:619

Clone Sequence Records

BO26912.complete Sequence

619 bp assembled on 2010-07-02

GenBank Submission: KX797848

> BO26912.complete
GAAGTTATCAGTCGACATGCTCCCCAACGATAAAAAAGGTTTTAAAGCAG
CAAAGAACGATAAGTTCTCGACCCATGCCCTCCTCAATGAGAATGACAAC
GACCAATCACTAAGCTCCGATGAGCAGGACGACATATTTTTCCTGATCTA
TCGGAAGGCACATACTTTGTTCCAGGCAGGAAAGTTATGGATGAGGCGTA
TGCGTTATCACGATGCACAAAGGGCATTTGAGAAAGCGATAACACGCTTG
AAAACTTGCAAAACTAGCAGTTTCGAACAGCAGTGCCGTAAAAAAGATAT
GCTTATCGCCCTTTTCGAAAGCTTGATGATCTGCTTCAACAAGATGAGGC
AGTCCAGGTGCGTCTGCTATGTCATGAAGGAACTTCGTCTCCTGACCATC
AATAATCCTTCGGCTTTGGCGCTCTGTCAGCACGGTCGTGCCCTAAGCGA
CTTGGGTAAATACCATCCATCCCGTTTGTGCTACATAAAGGCGTTGAAAA
AACGTCCTAGAGACCAGGGTATCAAGGATAAGATTACCAGAATCAGCAAG
AGAATCACAGAACTTGAGGATACCAATCAGATGCTTTCTCAGCTGAGTAT
AGCAAGCTTTCTAGACCAT

BO26912.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:13:06
Subject Length Description Subject Range Query Range Score Percent Strand
CG30075-RA 588 CG30075-PA 1..585 17..601 2925 100 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:13:07
Subject Length Description Subject Range Query Range Score Percent Strand
CG30075-RA 703 CG30075-RA 45..629 17..601 2925 100 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:13:04
Subject Length Description Subject Range Query Range Score Percent Strand
2R 25286936 2R 14376019..14376603 17..601 2925 100 Plus
Blast to na_te.dros performed on 2014-11-28 02:13:05 has no hits.

BO26912.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:51 Download gff for BO26912.complete
Subject Subject Range Query Range Percent Splice Strand
CG30075-RA 1..585 17..603 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:53 Download gff for BO26912.complete
Subject Subject Range Query Range Percent Splice Strand
CG30075-RA 45..629 17..603 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:25 Download gff for BO26912.complete
Subject Subject Range Query Range Percent Splice Strand
CG30075-RA 45..629 17..603 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:25 Download gff for BO26912.complete
Subject Subject Range Query Range Percent Splice Strand
2R 14376019..14376603 17..603 99   Plus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:53 Download gff for BO26912.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2R 10263524..10264108 17..603 99   Plus

BO26912.pep Sequence

Translation from 16 to 619

> BO26912.pep
MLPNDKKGFKAAKNDKFSTHALLNENDNDQSLSSDEQDDIFFLIYRKAHT
LFQAGKLWMRRMRYHDAQRAFEKAITRLKTCKTSSFEQQCRKKDMLIALF
ESLMICFNKMRQSRCVCYVMKELRLLTINNPSALALCQHGRALSDLGKYH
PSRLCYIKALKKRPRDQGIKDKITRISKRITELEDTNQMLSQLSIASFLD
H

BO26912.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:27:46
Subject Length Description Subject Range Query Range Score Percent Strand
CG30075-PA 195 CG30075-PA 1..195 1..195 1014 100 Plus
shu-PA 455 CG4735-PA 206..358 36..188 282 38.6 Plus