Clone BO26919 Report

Search the DGRC for BO26919

Clone and Library Details

Library:BO
Tissue Source:D. melanogaster
Created by:Joe Carlson
Date Registered:2004-06-03
Comments:Infusion clones with open reading frames
Original Plate Number:269
Well:19
Vector:pDNR-Dual
Associated Gene/TranscriptCG31600-RA
Protein status:BO26919.pep: Imported from assembly
Sequenced Size:733

Clone Sequence Records

BO26919.complete Sequence

733 bp assembled on 2010-07-02

GenBank Submission: KX796326

> BO26919.complete
GAAGTTATCAGTCGACATGGTAGAGGGCATGATAAAAAAGCTAACTGCTA
TTTTATTTGGGCTTGTATTGGCTGTGTTATTTCGAGTAATTATACCCTTT
ACTCTGCGACTTAAAAGCGCTGAAATAACCATTAATGTGCTTAACTGTTT
TAATTTTCTAACAAGTACCGTTTCCATTACCATTTGCCTGAATTTGGTCA
GCCTATACTTAGCCAATTTGCGTGATGATTGGCTTGTTCTCGGGCTTATA
CCGCTGCAGATACTCGTCCTTCATTGGACTTACTTCACAATTTCAAAACA
ACTAGAAGCCATGAACAGGAGCTATAGTACATTCATGGATAGCTTAAACC
TTAAATGGCTGGCATACTCCAATTTTAACGAGACAGATTGGCCTTCGATT
GAAAATGCGGTTTTATGCTGTGGACTGGAGGGTCCCCGTTCTTATATGGA
TTATCTACAAGGGGTTCCAACCCACTGCTACCATCCCGACCTTATCACCC
AAGGTTGCAGTGACTTTGTTAAAAACATTTTTATGCCGATACAACATATA
AGTCATTTGCAGCTCAGATTGGCTATTTTTGTGGAACTGGTAATTTTACT
TATTCTTGCTGCAACGCTTTTGAAGAAATGTATTTCTTTGATCGGCGAAA
GGAAACATAAAAGAGTTATTACACACGGGCTTGCGGTACTAATAGATTTA
GTTAAAAACACATTTGCAAGCTTTCTAGACCAT

BO26919.complete Blast Records

Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:11:42
Subject Length Description Subject Range Query Range Score Percent Strand
CG31600-RA 702 CG31600-PA 1..699 17..715 3495 100 Plus
CG31600-RB 687 CG31600-PB 1..684 17..715 3235 97.9 Plus
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:11:43
Subject Length Description Subject Range Query Range Score Percent Strand
CG31600-RA 929 CG31600-RA 57..755 17..715 3495 100 Plus
CG31600-RB 914 CG31600-RB 57..740 17..715 3235 97.9 Plus
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:11:40
Subject Length Description Subject Range Query Range Score Percent Strand
2L 23513712 2L 21914443..21914749 715..409 1535 100 Minus
2L 23513712 2L 21915016..21915199 244..61 920 100 Minus
2L 23513712 2L 21914800..21914967 411..244 840 100 Minus
2L 23513712 2L 21915258..21915302 61..17 225 100 Minus
Blast to na_te.dros performed on 2014-11-28 02:11:41 has no hits.

BO26919.complete Sim4 Records

Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:41 Download gff for BO26919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31600-RA 1..699 17..717 99   Plus
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:17 Download gff for BO26919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31600-RA 57..755 17..717 99   Plus
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:53 Download gff for BO26919.complete
Subject Subject Range Query Range Percent Splice Strand
CG31600-RA 57..755 17..717 99   Plus
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:53 Download gff for BO26919.complete
Subject Subject Range Query Range Percent Splice Strand
2L 21914802..21914966 245..409 100 <- Minus
2L 21914440..21914748 410..717 99 <- Minus
2L 21915016..21915198 62..244 100 <- Minus
2L 21915258..21915302 17..61 100   Minus
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:17 Download gff for BO26919.complete
Subject Subject Range Query Range Percent Splice Strand
arm_2L 21914440..21914748 410..717 99 <- Minus
arm_2L 21914802..21914966 245..409 100 <- Minus
arm_2L 21915016..21915198 62..244 100 <- Minus
arm_2L 21915258..21915302 17..61 100   Minus

BO26919.pep Sequence

Translation from 16 to 733

> BO26919.pep
MVEGMIKKLTAILFGLVLAVLFRVIIPFTLRLKSAEITINVLNCFNFLTS
TVSITICLNLVSLYLANLRDDWLVLGLIPLQILVLHWTYFTISKQLEAMN
RSYSTFMDSLNLKWLAYSNFNETDWPSIENAVLCCGLEGPRSYMDYLQGV
PTHCYHPDLITQGCSDFVKNIFMPIQHISHLQLRLAIFVELVILLILAAT
LLKKCISLIGERKHKRVITHGLAVLIDLVKNTFASFLDH

BO26919.pep Blast Records

Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:41
Subject Length Description Subject Range Query Range Score Percent Strand
CG31600-PA 233 CG31600-PA 1..233 1..233 1201 100 Plus
CG31600-PB 228 CG31600-PB 1..228 1..233 1161 97.9 Plus