BO26919.complete Sequence
733 bp assembled on 2010-07-02
GenBank Submission: KX796326
> BO26919.complete
GAAGTTATCAGTCGACATGGTAGAGGGCATGATAAAAAAGCTAACTGCTA
TTTTATTTGGGCTTGTATTGGCTGTGTTATTTCGAGTAATTATACCCTTT
ACTCTGCGACTTAAAAGCGCTGAAATAACCATTAATGTGCTTAACTGTTT
TAATTTTCTAACAAGTACCGTTTCCATTACCATTTGCCTGAATTTGGTCA
GCCTATACTTAGCCAATTTGCGTGATGATTGGCTTGTTCTCGGGCTTATA
CCGCTGCAGATACTCGTCCTTCATTGGACTTACTTCACAATTTCAAAACA
ACTAGAAGCCATGAACAGGAGCTATAGTACATTCATGGATAGCTTAAACC
TTAAATGGCTGGCATACTCCAATTTTAACGAGACAGATTGGCCTTCGATT
GAAAATGCGGTTTTATGCTGTGGACTGGAGGGTCCCCGTTCTTATATGGA
TTATCTACAAGGGGTTCCAACCCACTGCTACCATCCCGACCTTATCACCC
AAGGTTGCAGTGACTTTGTTAAAAACATTTTTATGCCGATACAACATATA
AGTCATTTGCAGCTCAGATTGGCTATTTTTGTGGAACTGGTAATTTTACT
TATTCTTGCTGCAACGCTTTTGAAGAAATGTATTTCTTTGATCGGCGAAA
GGAAACATAAAAGAGTTATTACACACGGGCTTGCGGTACTAATAGATTTA
GTTAAAAACACATTTGCAAGCTTTCTAGACCAT
BO26919.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:11:42
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31600-RA | 702 | CG31600-PA | 1..699 | 17..715 | 3495 | 100 | Plus |
CG31600-RB | 687 | CG31600-PB | 1..684 | 17..715 | 3235 | 97.9 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:11:43
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31600-RA | 929 | CG31600-RA | 57..755 | 17..715 | 3495 | 100 | Plus |
CG31600-RB | 914 | CG31600-RB | 57..740 | 17..715 | 3235 | 97.9 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:11:40
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
2L | 23513712 | 2L | 21914443..21914749 | 715..409 | 1535 | 100 | Minus |
2L | 23513712 | 2L | 21915016..21915199 | 244..61 | 920 | 100 | Minus |
2L | 23513712 | 2L | 21914800..21914967 | 411..244 | 840 | 100 | Minus |
2L | 23513712 | 2L | 21915258..21915302 | 61..17 | 225 | 100 | Minus |
Blast to na_te.dros performed on 2014-11-28 02:11:41 has no hits.
BO26919.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 10:02:41 Download gff for
BO26919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 1..699 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:13:17 Download gff for
BO26919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 57..755 | 17..717 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:23:53 Download gff for
BO26919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
CG31600-RA | 57..755 | 17..717 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:23:53 Download gff for
BO26919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
2L | 21914802..21914966 | 245..409 | 100 | <- | Minus |
2L | 21914440..21914748 | 410..717 | 99 | <- | Minus |
2L | 21915016..21915198 | 62..244 | 100 | <- | Minus |
2L | 21915258..21915302 | 17..61 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:13:17 Download gff for
BO26919.complete
Subject | Subject Range | Query Range | Percent | Splice | Strand |
arm_2L | 21914440..21914748 | 410..717 | 99 | <- | Minus |
arm_2L | 21914802..21914966 | 245..409 | 100 | <- | Minus |
arm_2L | 21915016..21915198 | 62..244 | 100 | <- | Minus |
arm_2L | 21915258..21915302 | 17..61 | 100 | | Minus |
BO26919.pep Sequence
Translation from 16 to 733
> BO26919.pep
MVEGMIKKLTAILFGLVLAVLFRVIIPFTLRLKSAEITINVLNCFNFLTS
TVSITICLNLVSLYLANLRDDWLVLGLIPLQILVLHWTYFTISKQLEAMN
RSYSTFMDSLNLKWLAYSNFNETDWPSIENAVLCCGLEGPRSYMDYLQGV
PTHCYHPDLITQGCSDFVKNIFMPIQHISHLQLRLAIFVELVILLILAAT
LLKKCISLIGERKHKRVITHGLAVLIDLVKNTFASFLDH
BO26919.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:41
Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
CG31600-PA | 233 | CG31600-PA | 1..233 | 1..233 | 1201 | 100 | Plus |
CG31600-PB | 228 | CG31600-PB | 1..228 | 1..233 | 1161 | 97.9 | Plus |