BO26923.complete Sequence
850 bp assembled on 2010-07-02
GenBank Submission: KX797728
> BO26923.complete
GAAGTTATCAGTCGACATGTTTCGTTTGTTGGCCGGAACTGAGCCAGAAT
TATCCTCCGGCAATCTCCAAGAGCCCTTAAGTTTACGCGATGAGCTCCGC
TTCCGTAGACTCGGCTTACATCATCATTCTCCCACGGACTTCCTACGTTC
GCAATGGCAGTCTGGGCCGAAATCTTCTATTTTCTTGGCTTACCGATGGG
CATTAGGCGGATTCTTCGGTGCCGGCGTGGTCGGTTGTATTTCTGAGTAC
TACAACCACGGAAATTTTTTTATATTTTTGACCAACTGGGGATTTGTATT
GTGTGGCGTTACCAGTATTGCCGGAGCAATACTTGTGACTATCTATCACT
ACAAGCCGGAAACCTGGGTTCCCCCGAGCGGCTGGATAAAGGTTTATTGG
GCTTGCTATTGGACCAACATCACATTGGCGTGCTTAATTGCATTCGCCTA
TTGGACAGCCATATATCCCAAGGATCGGGTGTTAACTAATCCGACTCGGG
TTTCCGATTTGTATAACATATGGACTCACTTGCTGCCACCTATTTTCTTC
ACCATCGATAACTTTCTGGTGGCGCAACCAGCTCGACTTCTTCACTTTGT
TTATCCACTGGCATTCCTCCATACTTACGGAATTTTCGCAATACTATTCT
ATGCCCTGGGCGGTCGTAACTTGGACGGAAAACACTATATATATCCGTTT
TTGAATTTTGCTAGGCCAAAGATAGTTTTAAAAACCGTAACATATCTTAG
TATAGTTCTGGTGTCCTTGTCCAGTCTAGAATATGGAGTCTATCGACTAC
GCAATTTCATAGCACGCAAGCTGGGGAAACTTGCAAGCTTTCTAGACCAT
BO26923.complete Blast Records
Blast to dmel-all-CDS-r6.02.fasta performed 2014-11-28 02:14:05
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4480-RC | 819 | CG4480-PC | 1..816 | 17..832 | 4080 | 100 | Plus |
| CG4480-RB | 819 | CG4480-PB | 1..816 | 17..832 | 4080 | 100 | Plus |
Blast to dmel-all-transcript-r6.02.fasta performed 2014-11-28 02:14:06
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4480-RC | 1052 | CG4480-RC | 66..881 | 17..832 | 4080 | 100 | Plus |
| CG4480-RB | 1422 | CG4480-RB | 66..881 | 17..832 | 4080 | 100 | Plus |
Blast to na_all.dmel.RELEASE6 performed 2014-11-28 02:14:02
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| 2L | 23513712 | 2L | 14871182..14871487 | 673..368 | 1530 | 100 | Minus |
| 2L | 23513712 | 2L | 14871553..14871766 | 368..155 | 1070 | 100 | Minus |
| 2L | 23513712 | 2L | 14870972..14871131 | 832..673 | 800 | 100 | Minus |
| 2L | 23513712 | 2L | 14871820..14871957 | 154..17 | 690 | 100 | Minus |
Blast to na_te.dros performed 2014-11-28 02:14:04
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| Dsim\ninja | 6644 | Dsim\ninja DSRN 6644bp Derived from D83207 (Rel. 53, Last updated, Version 4). | 2907..2947 | 237..196 | 108 | 79.1 | Minus |
| aurora-element | 4263 | aurora-element DMAURA 4263bp Derived from AB022762 (d1268008) (Rel. 59, Last updated, Version 1). | 2026..2066 | 237..196 | 108 | 79.1 | Minus |
BO26923.complete Sim4 Records
Sim4 to dmel-all-transcript-r5.12.fasta performed 2010-07-02 12:46:24 Download gff for
BO26923.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4480-RA | 72..725 | 23..676 | 99 | | Plus |
Sim4 to dmel-all-transcript-r5.52.fasta performed 2013-08-04 21:14:19 Download gff for
BO26923.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4480-RB | 72..881 | 23..834 | 99 | | Plus |
Sim4 to dmel-all-transcript-r6.02.fasta performed 2014-11-28 03:24:50 Download gff for
BO26923.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| CG4480-RB | 72..881 | 23..834 | 99 | | Plus |
Sim4 to na_all.dmel.RELEASE6 performed 2014-11-28 03:24:50 Download gff for
BO26923.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| 2L | 14870970..14871131 | 673..834 | 98 | <- | Minus |
| 2L | 14871183..14871486 | 369..672 | 100 | <- | Minus |
| 2L | 14871553..14871766 | 155..368 | 100 | <- | Minus |
| 2L | 14871820..14871951 | 23..154 | 100 | | Minus |
Sim4 to na_arms.dmel.RELEASE5 performed 2013-08-04 21:14:19 Download gff for
BO26923.complete
| Subject | Subject Range | Query Range | Percent | Splice | Strand |
|---|
| arm_2L | 14870970..14871131 | 673..834 | 98 | <- | Minus |
| arm_2L | 14871183..14871486 | 369..672 | 100 | <- | Minus |
| arm_2L | 14871553..14871766 | 155..368 | 100 | <- | Minus |
| arm_2L | 14871820..14871951 | 23..154 | 100 | | Minus |
BO26923.pep Sequence
Translation from 16 to 850
> BO26923.pep
MFRLLAGTEPELSSGNLQEPLSLRDELRFRRLGLHHHSPTDFLRSQWQSG
PKSSIFLAYRWALGGFFGAGVVGCISEYYNHGNFFIFLTNWGFVLCGVTS
IAGAILVTIYHYKPETWVPPSGWIKVYWACYWTNITLACLIAFAYWTAIY
PKDRVLTNPTRVSDLYNIWTHLLPPIFFTIDNFLVAQPARLLHFVYPLAF
LHTYGIFAILFYALGGRNLDGKHYIYPFLNFARPKIVLKTVTYLSIVLVS
LSSLEYGVYRLRNFIARKLGKLASFLDH
BO26923.pep Blast Records
Blast to dmel-all-translation-r6.02.fasta performed 2014-11-29 02:31:59
| Subject | Length | Description | Subject Range | Query Range | Score | Percent | Strand |
|---|
| CG4480-PC | 272 | CG4480-PC | 1..272 | 1..272 | 1474 | 100 | Plus |
| CG4480-PB | 272 | CG4480-PB | 1..272 | 1..272 | 1474 | 100 | Plus |
| CG9555-PC | 275 | CG9555-PC | 6..256 | 18..271 | 536 | 40.2 | Plus |
| CG9555-PA | 275 | CG9555-PA | 6..256 | 18..271 | 536 | 40.2 | Plus |
| CG17906-PA | 275 | CG17906-PA | 13..256 | 23..271 | 496 | 36.9 | Plus |
